RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SULT1A2P50226 295 aa13.05□□□□□ -0.32
PRPF40B-216ENST00000552301 Q86TA4 180 aa13.05□□□□□ -0.32
PRPF40B-216ENST00000552301 KCNS1Q96KK3 526 aa13.05□□□□□ -0.32
PRPF40B-216ENST00000552301 LINC00479Q96M42 142 aa13.05□□□□□ -0.32
PRPF40B-216ENST00000552301 SDF2L1Q9HCN8 221 aa13.05□□□□□ -0.32
PRPF40B-216ENST00000552301 TDRG1Q3Y452 100 aa13.04□□□□□ -0.32
PRPF40B-216ENST00000552301 C15orf53Q8NAA6 179 aa13.04□□□□□ -0.32
PRPF40B-216ENST00000552301 HYDINQ4G0P3 5121 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 SPINK4O60575 86 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 PFN1P07737 140 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 P0DMU3 169 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 FAM231AP0DMU4 169 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 FAM231CP0DMU5 169 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 OR5I1Q13606 314 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 FMC1Q96HJ9 113 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-216ENST00000552301 LGALS9BQ3B8N2 356 aa13.02□□□□□ -0.33
PRPF40B-216ENST00000552301 UBE2DNLQ8IWF7 75 aa13.02□□□□□ -0.33
PRPF40B-216ENST00000552301 SPXQ9BT56 116 aa13.02□□□□□ -0.33
PRPF40B-216ENST00000552301 MDFICQ9P1T7 246 aa13.02□□□□□ -0.33
PRPF40B-216ENST00000552301 GNG13Q9P2W3 67 aa13.02□□□□□ -0.33
PRPF40B-216ENST00000552301 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
PRPF40B-216ENST00000552301 ZNF80P51504 273 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-216ENST00000552301 ZFP30Q9Y2G7 519 aa13.01□□□□□ -0.33
PRPF40B-216ENST00000552301 BIRC6Q9NR09 4857 aa13□□□□□ -0.33
PRPF40B-216ENST00000552301 NUDT3O95989 172 aa13□□□□□ -0.33
PRPF40B-216ENST00000552301 IFNA1P01562 189 aa13□□□□□ -0.33
PRPF40B-216ENST00000552301 TYMSP04818 313 aa13□□□□□ -0.33
PRPF40B-216ENST00000552301 C18orf15Q96N68 181 aa13□□□□□ -0.33
PRPF40B-216ENST00000552301 IGHV3-16A0A0C4DH30 117 aa12.99□□□□□ -0.33
PRPF40B-216ENST00000552301 SCO2A0A1W2PP80 73 aa12.99□□□□□ -0.33
PRPF40B-216ENST00000552301 GNRH2O43555 120 aa12.99□□□□□ -0.33
PRPF40B-216ENST00000552301 S100A9P06702 114 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-216ENST00000552301 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-216ENST00000552301 TRBV6-1A0A0K0K1D8 114 aa12.98□□□□□ -0.33
PRPF40B-216ENST00000552301 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
PRPF40B-216ENST00000552301 MUC4Q99102 2169 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 TRAV26-1A0A087WT03 109 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 M0R2P5 195 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 IGHV3-53P01767 116 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 HOXA5P20719 270 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 CCL20P78556 96 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 POM121L12Q8N7R1 296 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 TXNDC17Q9BRA2 123 aa12.97□□□□□ -0.33
PRPF40B-216ENST00000552301 A0A0J9YY99 117 aa12.96□□□□□ -0.33
PRPF40B-216ENST00000552301 LTAP01374 205 aa12.96□□□□□ -0.33
PRPF40B-216ENST00000552301 ALKAL2Q6UX46 152 aa12.96□□□□□ -0.33
PRPF40B-216ENST00000552301 ZC2HC1AQ96GY0 325 aa12.96□□□□□ -0.33
PRPF40B-216ENST00000552301 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
PRPF40B-216ENST00000552301 ORM1P02763 201 aa12.95□□□□□ -0.34
PRPF40B-216ENST00000552301 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-216ENST00000552301 FAM162BQ5T6X4 162 aa12.95□□□□□ -0.34
PRPF40B-216ENST00000552301 RASL10AQ92737 203 aa12.95□□□□□ -0.34
PRPF40B-216ENST00000552301 BLOC1S1P78537 153 aa12.94□□□□□ -0.34
PRPF40B-216ENST00000552301 NHLRC2Q8NBF2 726 aa12.94□□□□□ -0.34
PRPF40B-216ENST00000552301 TRGV4A0A0C4DH28 118 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 B4DEV8 164 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 SH2D1AO60880 128 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 BCL2P10415 239 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 ASIPP42127 132 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 SLAQ13239 276 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 RNF212Q495C1 297 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 COX8CQ7Z4L0 72 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 BAGE2Q86Y30 109 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 BOLA1Q9Y3E2 137 aa12.93□□□□□ -0.34
PRPF40B-216ENST00000552301 C9JCJ5 164 aa12.92□□□□□ -0.34
PRPF40B-216ENST00000552301 H3BNG1 76 aa12.92□□□□□ -0.34
PRPF40B-216ENST00000552301 M0R036 132 aa12.92□□□□□ -0.34
PRPF40B-216ENST00000552301 CCL18P55774 89 aa12.92□□□□□ -0.34
PRPF40B-216ENST00000552301 OR4C5Q8NGB2 326 aa12.92□□□□□ -0.34
PRPF40B-216ENST00000552301 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
PRPF40B-216ENST00000552301 TRAV4A0A0B4J268 109 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 IGKV3D-20A0A0C4DH25 116 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 PAX4O43316 350 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 PDE6DO43924 150 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 SFTA3P0C7M3 94 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 RPL35P42766 123 aaKnown RBP12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 ZNF876PQ49A33 203 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 C9orf85Q96MD7 179 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 PRO0255Q9UI72 69 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 VAX2Q9UIW0 290 aa12.91□□□□□ -0.34
PRPF40B-216ENST00000552301 CRIP1P50238 77 aa12.9□□□□□ -0.34
PRPF40B-216ENST00000552301 ZNF674Q2M3X9 581 aa12.9□□□□□ -0.34
PRPF40B-216ENST00000552301 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-216ENST00000552301 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-216ENST00000552301 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
PRPF40B-216ENST00000552301 HHLA3Q9XRX5 114 aa12.89□□□□□ -0.35
PRPF40B-216ENST00000552301 TMSB15BA0A087X1C1 80 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 KRBOX1C9JBD0 128 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 H3BVH4 76 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 FHL2Q14192 279 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 LINC01559Q495D7 138 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 PRR27Q6MZM9 219 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 PCNPQ8WW12 178 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 DERL1Q9BUN8 251 aa12.88□□□□□ -0.35
PRPF40B-216ENST00000552301 MED9Q9NWA0 146 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms