RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 TMEM8BA6NDV4 472 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 PRAC2D3DTV9 90 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 E9PLD3 99 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 G3V4G9 280 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 K7EMT4 169 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 IGHV3-23P01764 117 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 S100A4P26447 101 aaKnown RBP4.1□□□□□ -1.75
CCNT1-204ENST00000551989 ZFP36P26651 326 aaKnown RBP4.1□□□□□ -1.75
CCNT1-204ENST00000551989 HLA-DMBP28068 263 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 UQCRFS1P47985 274 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 HERVK_113P61574 105 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 LMO4P61968 165 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 PRB3Q04118 309 aaPredicted RBP4.1□□□□□ -1.75
CCNT1-204ENST00000551989 ERCC8Q13216 396 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 FOXE3Q13461 319 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 PCP2Q8IVA1 136 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 AJUBAQ96IF1 538 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 FAM19A4Q96LR4 140 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 C18orf15Q96N68 181 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 MCRIP2Q9BUT9 160 aaKnown RBP4.1□□□□□ -1.75
CCNT1-204ENST00000551989 CSTL1Q9H114 145 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 BEX4Q9NWD9 120 aaPredicted RBP4.1□□□□□ -1.75
CCNT1-204ENST00000551989 UFC1Q9Y3C8 167 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.1□□□□□ -1.75
CCNT1-204ENST00000551989 ABCA1O95477 2261 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 APC2O95996 2303 aa4.1□□□□□ -1.75
CCNT1-204ENST00000551989 CNOT1A5YKK6 2376 aaKnown RBP4.09□□□□□ -1.75
CCNT1-204ENST00000551989 H3BVH4 76 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 SOCS3O14543 225 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 EIF4EBP3O60516 100 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-204ENST00000551989 IGHV1-69P01742 117 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 IGHG2P01859 326 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 TRGV3P03979 118 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 GCSHP23434 173 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 ID1P41134 155 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 RNF151Q2KHN1 245 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 PRR31Q5SQ13 230 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 ZFAND2AQ8N6M9 145 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 NEXN-AS1Q8NBZ9 246 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 PHLDA1Q8WV24 401 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-204ENST00000551989 TMEM141Q96I45 108 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 JMJD8Q96S16 334 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 TIMM17AQ99595 171 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 MRPL35Q9NZE8 188 aaKnown RBP4.09□□□□□ -1.75
CCNT1-204ENST00000551989 MSRB1Q9NZV6 116 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 TP73-AS1Q9UF72 201 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 CYSLTR1Q9Y271 337 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 PHLDA3Q9Y5J5 127 aa4.09□□□□□ -1.75
CCNT1-204ENST00000551989 EYSQ5T1H1 3165 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 TRBV7-3A0A075B6L6 115 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 IGKV2D-26A0A0A0MRZ7 120 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 TRAV40A0A0B4J280 105 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 TRBV6-5A0A0K0K1A5 114 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 MYMXA0A1B0GTQ4 84 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 LY6HO94772 140 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 ROS1P08922 2347 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 GATA3P23771 443 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 FXYD2P54710 66 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 RHOHQ15669 191 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 GTSCR1Q86UQ5 136 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 RNF182Q8N6D2 247 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 ATP6V0E2Q8NHE4 81 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 ZNF479Q96JC4 524 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 BPESC1Q9GZL8 116 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 DAZ1Q9NQZ3 744 aaKnown RBP4.08□□□□□ -1.76
CCNT1-204ENST00000551989 SPANXB1Q9NS25 103 aaPredicted RBP4.08□□□□□ -1.76
CCNT1-204ENST00000551989 C11orf21Q9P2W6 132 aa4.08□□□□□ -1.76
CCNT1-204ENST00000551989 AGRNO00468 2067 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 A8MZ25 164 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 KLLNB2CW77 178 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 IGLL5B9A064 214 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 G3V318 75 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 PPIFP30405 207 aaKnown RBP4.07□□□□□ -1.76
CCNT1-204ENST00000551989 CRYBA4P53673 196 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 RIPPLY3P57055 190 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 RRN3P1Q2M238 152 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 C12orf74Q32Q52 190 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 C2orf66Q6UXQ4 117 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 LCNL1Q6ZST4 164 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 SYT8Q8NBV8 401 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 RASL10AQ92737 203 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 RAB37Q96AX2 223 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 HIST1H4GQ99525 98 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 KIR2DL4Q99706 377 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 UBTD1Q9HAC8 227 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 EDA2RQ9HAV5 297 aa4.07□□□□□ -1.76
CCNT1-204ENST00000551989 NHP2Q9NX24 153 aaKnown RBP4.07□□□□□ -1.76
CCNT1-204ENST00000551989 ANKHD1Q8IWZ3 2542 aaKnown RBP4.06□□□□□ -1.76
CCNT1-204ENST00000551989 MYO15AQ9UKN7 3530 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 TRBV20-1A0A075B6N2 111 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 IGHV3-35A0A0C4DH35 117 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 A6NDX4 124 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 C11orf86A6NJI1 115 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 ZNF561-AS1K7EIQ3 104 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 LGALS9O00182 355 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 VCYO14598 125 aa4.06□□□□□ -1.76
CCNT1-204ENST00000551989 GATA1P15976 413 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms