RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PMVKQ15126 192 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 ZNF826PQ6ZT77 177 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 MDP1Q86V88 176 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 FAM216BQ8N7L0 139 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 METTL26Q96S19 204 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 UBTD1Q9HAC8 227 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 EDA2RQ9HAV5 297 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 MSRB1Q9NZV6 116 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 DKK4Q9UBT3 224 aa4.01□□□□□ -1.77
LSM3P2-201ENST00000551246 HCFC1P51610 2035 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 A0A0C4DFX4 3053 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 IGHV1OR15-9A0A0B4J2B8 117 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 C11orf86A6NJI1 115 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 H3BTX0 84 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 H3BVH4 76 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 LHBP01229 141 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 RFPL3SP0C7P2 107 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 COX6A1P12074 109 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 TSPEAR-AS2P59090 65 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 ZNF56Q15929 161 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 C4orf26Q17RF5 130 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 TMEM155Q4W5P6 130 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 PAPPA-AS1Q5QFB9 102 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 ZNF491Q8N8L2 437 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 C8orf31Q8N9H6 132 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 SMCR5Q8TEV8 140 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 SMIM2Q9BVW6 85 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 SCNM1Q9BWG6 230 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 CYSTM1Q9H1C7 97 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 PRO0628Q9UI54 55 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 RPUSD1Q9UJJ7 312 aaKnown RBP4□□□□□ -1.77
LSM3P2-201ENST00000551246 SEC16AO15027 2179 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 TANC2Q9HCD6 1990 aa4□□□□□ -1.77
LSM3P2-201ENST00000551246 MED12Q93074 2177 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 PCNTO95613 3336 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 I3L2K1 104 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 J3QLI3 93 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 LST1O00453 97 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 TSHBP01222 138 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 IGKV1-17P01599 117 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 IGHV3-9P01782 118 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 SLPIP03973 132 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 CD59P13987 128 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 ZNF22P17026 224 aaPredicted RBP3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 PSMB8P28062 276 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 EMP1P54849 157 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 SRSF9Q13242 221 aaKnown RBP eCLIP3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 ORMDL2Q53FV1 153 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 SFTA2Q6UW10 78 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 C2orf82Q6UX34 121 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 LINC00311Q8N616 119 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 DAND5Q8N907 189 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 KLHL30-AS1Q8NEE0 82 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 FAM19A4Q96LR4 140 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 Q96MF0 132 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 C17orf77Q96MU5 243 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 HEATR1Q9H583 2144 aaKnown RBP3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 PYGO1Q9Y3Y4 419 aa3.99□□□□□ -1.77
LSM3P2-201ENST00000551246 TRBV7-1A0A0A6YYK4 115 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 IGHV1-69DA0A0B4J2H0 117 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 MBD3L4A6NDZ8 208 aaPredicted RBP3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 MBD3L3A6NE82 208 aaPredicted RBP3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 MBD3L5A6NJ08 208 aaPredicted RBP3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 IGIPA6NJ69 53 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 M0R381 172 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 ATOX1O00244 68 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 TRIAP1O43715 76 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 TRACP01848 142 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 HOXA4Q00056 320 aaPredicted RBP3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 PLGLAQ15195 96 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 HES3Q5TGS1 186 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 HRCT1Q6UXD1 115 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 LITAFQ99732 161 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 FAM173AQ9BQD7 235 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 PEMTQ9UBM1 199 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
LSM3P2-201ENST00000551246 BRWD1Q9NSI6 2320 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 IGKV3D-20A0A0C4DH25 116 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 IGHV7-4-1A0A0J9YVY3 117 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 PINLYPA6NC86 204 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 SDHAF1A6NFY7 115 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 M0R3E3 92 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 CDX4O14627 284 aaPredicted RBP3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 FSHBP01225 129 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 NXPH1P58417 271 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 CCL8P80075 99 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 C10orf55Q5SWW7 151 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 TMEM86BQ8N661 226 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 C14orf178Q8N769 122 aaPredicted RBP3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 SCGB3A1Q96QR1 104 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 SLC50A1Q9BRV3 221 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 PRORYQ9H606 182 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 JPT2Q9H910 190 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 FSCN3Q9NQT6 498 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 KNTC1P50748 2209 aa3.97□□□□□ -1.77
LSM3P2-201ENST00000551246 TINCRA0A1B0GVN0 87 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms