RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 H2AFB1P0C5Y9 115 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 TMEM183BQ1AE95 376 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 SMUG1Q53HV7 270 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 SLC51BQ86UW2 128 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 TMEM183AQ8IXX5 376 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 POM121L12Q8N7R1 296 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 SPXQ9BT56 116 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
PRPF40B-211ENST00000551063 GCGP01275 180 aa10.81□□□□□ -0.68
PRPF40B-211ENST00000551063 PFN1P07737 140 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-211ENST00000551063 Q86TA4 180 aa10.81□□□□□ -0.68
PRPF40B-211ENST00000551063 C8orf49Q96NF6 230 aa10.81□□□□□ -0.68
PRPF40B-211ENST00000551063 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
PRPF40B-211ENST00000551063 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 TYMSP04818 313 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 HOXA5P20719 270 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 ZNF80P51504 273 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 OR5I1Q13606 314 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 RNF212Q495C1 297 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 CST9LP1Q5W188 147 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 UBE2DNLQ8IWF7 75 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 C9orf62Q8N4C0 152 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 LINC00479Q96M42 142 aa10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
PRPF40B-211ENST00000551063 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 TRAV1-1A0A0B4J248 108 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 TRBV6-1A0A0K0K1D8 114 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 A0A1B0GV50 99 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 H3BNG1 76 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 PAGE4O60829 102 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 SULT1A2P50226 295 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 UBE2G1P62253 170 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 RASL10AQ92737 203 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
PRPF40B-211ENST00000551063 NUDT3O95989 172 aa10.78□□□□□ -0.68
PRPF40B-211ENST00000551063 AKR1C3P42330 323 aa10.78□□□□□ -0.68
PRPF40B-211ENST00000551063 FAM3BP58499 235 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-211ENST00000551063 COX8CQ7Z4L0 72 aa10.78□□□□□ -0.68
PRPF40B-211ENST00000551063 C11orf21Q9P2W6 132 aa10.78□□□□□ -0.68
PRPF40B-211ENST00000551063 TEX46H3BTG2 121 aa10.77□□□□□ -0.69
PRPF40B-211ENST00000551063 GNRH2O43555 120 aa10.77□□□□□ -0.69
PRPF40B-211ENST00000551063 MANBALQ9NQG1 85 aa10.77□□□□□ -0.69
PRPF40B-211ENST00000551063 M0R2P5 195 aa10.76□□□□□ -0.69
PRPF40B-211ENST00000551063 SLAQ13239 276 aa10.76□□□□□ -0.69
PRPF40B-211ENST00000551063 MUC4Q99102 2169 aa10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 A0A0J9YY99 117 aa10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 FABP5P3A8MUU1 101 aa10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 LTAP01374 205 aa10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 S100A9P06702 114 aaKnown RBP10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
PRPF40B-211ENST00000551063 SCO2A0A1W2PP80 73 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 IGHV3-53P01767 116 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 CCL18P55774 89 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 VSIG2Q96IQ7 327 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 C9orf85Q96MD7 179 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 PRO0255Q9UI72 69 aa10.74□□□□□ -0.69
PRPF40B-211ENST00000551063 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 IGKV3D-20A0A0C4DH25 116 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 CCL20P78556 96 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 FHL2Q14192 279 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 FAM162BQ5T6X4 162 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 PTH2Q96A98 100 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 GNG13Q9P2W3 67 aa10.73□□□□□ -0.69
PRPF40B-211ENST00000551063 SH2D1AO60880 128 aa10.72□□□□□ -0.69
PRPF40B-211ENST00000551063 IFNA1P01562 189 aa10.72□□□□□ -0.69
PRPF40B-211ENST00000551063 CRIP1P50238 77 aa10.72□□□□□ -0.69
PRPF40B-211ENST00000551063 C11orf52Q96A22 123 aa10.72□□□□□ -0.69
PRPF40B-211ENST00000551063 ZNF479Q96JC4 524 aa10.72□□□□□ -0.69
PRPF40B-211ENST00000551063 FRAS1Q86XX4 4008 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 PAX4O43316 350 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 SFTA3P0C7M3 94 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 CRYBA4P53673 196 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 ZNF674Q2M3X9 581 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 OR4C5Q8NGB2 326 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 HHLA3Q9XRX5 114 aa10.71□□□□□ -0.69
PRPF40B-211ENST00000551063 DNAH17Q9UFH2 4485 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 A0A096LPF7 62 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 TRGV4A0A0C4DH28 118 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 CIDEAO60543 219 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 ORM1P02763 201 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 S100A4P26447 101 aaKnown RBP10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 ASIPP42127 132 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 ZNF876PQ49A33 203 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 LINC00588Q9Y4M8 146 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 ICOSQ9Y6W8 199 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 FAT2Q9NYQ8 4349 aa10.7□□□□□ -0.7
PRPF40B-211ENST00000551063 B4DEV8 164 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 KRBOX1C9JBD0 128 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 C9JCJ5 164 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 BCL2P10415 239 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 TAGLN2P37802 199 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 PIK3CD-AS1Q5SR53 167 aa10.69□□□□□ -0.7
PRPF40B-211ENST00000551063 DNLZQ5SXM8 178 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms