RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TMEM178BH3BS89 294 aa9.4□□□□□ -0.9
VDR-208ENST00000550325 CDX4O14627 284 aaPredicted RBP9.4□□□□□ -0.9
VDR-208ENST00000550325 TIMM23O14925 209 aa9.4□□□□□ -0.9
VDR-208ENST00000550325 Q6ZQT7 251 aa9.4□□□□□ -0.9
VDR-208ENST00000550325 SEM1Q6ZVN7 128 aa9.4□□□□□ -0.9
VDR-208ENST00000550325 SMIM20Q8N5G0 67 aa9.4□□□□□ -0.9
VDR-208ENST00000550325 PIFOQ8TCI5 191 aa9.4□□□□□ -0.9
VDR-208ENST00000550325 CEACAM4O75871 244 aa9.4□□□□□ -0.91
VDR-208ENST00000550325 SNCGO76070 127 aa9.4□□□□□ -0.91
VDR-208ENST00000550325 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.91
VDR-208ENST00000550325 CARD19Q96LW7 228 aa9.4□□□□□ -0.91
VDR-208ENST00000550325 ARHGAP32A7KAX9 2087 aa9.4□□□□□ -0.91
VDR-208ENST00000550325 TCL1BO95988 128 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 CD59P13987 128 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 C9JAW5 83 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 ZNF688P0C7X2 276 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 ADGRG4Q8IZF6 3080 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
VDR-208ENST00000550325 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
VDR-208ENST00000550325 PDE6HQ13956 83 aa9.38□□□□□ -0.91
VDR-208ENST00000550325 C21orf62Q9NYP8 219 aa9.38□□□□□ -0.91
VDR-208ENST00000550325 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
VDR-208ENST00000550325 BUB1B-PAK6H3BSN5 160 aa9.38□□□□□ -0.91
VDR-208ENST00000550325 LINC00311Q8N616 119 aa9.38□□□□□ -0.91
VDR-208ENST00000550325 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
VDR-208ENST00000550325 MRPS12O15235 138 aaKnown RBP9.37□□□□□ -0.91
VDR-208ENST00000550325 ADIPOQQ15848 244 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 HERV-K104P63124 156 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 TCF15Q12870 199 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 TMEM170BQ5T4T1 132 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 RAB1BQ9H0U4 201 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 BSPH1Q075Z2 132 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
VDR-208ENST00000550325 RPL39LQ96EH5 51 aaKnown RBP9.37□□□□□ -0.91
VDR-208ENST00000550325 IGHV3-64A0A075B6Q5 118 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 DLX6P56179 175 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 OR11H6Q8NGC7 330 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 VSTM5A8MXK1 200 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 TRPT1Q86TN4 253 aaKnown RBP9.36□□□□□ -0.91
VDR-208ENST00000550325 C14orf178Q8N769 122 aaPredicted RBP9.36□□□□□ -0.91
VDR-208ENST00000550325 CRYGBP07316 175 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 ATP6V0E2Q8NHE4 81 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
VDR-208ENST00000550325 C5orf64Q2M2E5 130 aa9.35□□□□□ -0.91
VDR-208ENST00000550325 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
VDR-208ENST00000550325 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
VDR-208ENST00000550325 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
VDR-208ENST00000550325 IGKV3-7A0A075B6H7 116 aa9.35□□□□□ -0.91
VDR-208ENST00000550325 CCDC179H3BU77 68 aa9.35□□□□□ -0.91
VDR-208ENST00000550325 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
VDR-208ENST00000550325 NBR2O15453 112 aa9.34□□□□□ -0.91
VDR-208ENST00000550325 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
VDR-208ENST00000550325 SLC25A20O43772 301 aa9.34□□□□□ -0.91
VDR-208ENST00000550325 NRACQ8N912 160 aa9.34□□□□□ -0.91
VDR-208ENST00000550325 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.91
VDR-208ENST00000550325 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 ECSCRQ19T08 205 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 NDUFA11Q86Y39 141 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 AGPAT4-IT1Q9H0P7 198 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 HERVK_113P61574 105 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 ORMDL2Q53FV1 153 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 FAM215AQ9Y5M1 114 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 ATMQ13315 3056 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 MBD3L4A6NDZ8 208 aaPredicted RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 MBD3L3A6NE82 208 aaPredicted RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 MBD3L5A6NJ08 208 aaPredicted RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 MBD3L2Q8NHZ7 208 aaPredicted RBP9.33□□□□□ -0.92
VDR-208ENST00000550325 BAALCQ8WXS3 180 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 AJUBAQ96IF1 538 aa9.33□□□□□ -0.92
VDR-208ENST00000550325 GAGE12JA6NER3 117 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 GAGE7O76087 117 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 GAGE12FP0CL80 117 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 GAGE12GP0CL81 117 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 GAGE12IP0CL82 117 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 GAGE4Q13068 117 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 CFAP161Q6P656 301 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 Q6ZS46 218 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 PHLDA3Q9Y5J5 127 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 F5H697 171 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 CRLF1O75462 422 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 NDPQ00604 133 aa9.32□□□□□ -0.92
VDR-208ENST00000550325 IGLV1-47P01700 117 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 CLEC3BP05452 202 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 RPL11P62913 178 aaKnown RBP9.31□□□□□ -0.92
VDR-208ENST00000550325 RASL10AQ92737 203 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 TRBV7-9A0A0J9YWB2 115 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
VDR-208ENST00000550325 IGHG4P01861 327 aa9.31□□□□□ -0.92
VDR-208ENST00000550325 FANCD2OSQ96PS1 177 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms