RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MGPP08493 103 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 ATP5J2P56134 94 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 SMIM15Q7Z3B0 74 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 PRR25Q96S07 402 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 H3BVH4 76 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 NPFFO15130 113 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 SAA4P35542 130 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 FXYD2P54710 66 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 NRGNQ92686 78 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
LINC00661-204ENST00000549354 ATP6V0E1O15342 81 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 TTC9CQ8N5M4 171 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 NHP2Q9NX24 153 aaKnown RBP8.54□□□□□ -1.04
LINC00661-204ENST00000549354 IGHV4-30-2A0A087WSY4 118 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 S100A4P26447 101 aaKnown RBP8.54□□□□□ -1.04
LINC00661-204ENST00000549354 GTF2H5Q6ZYL4 71 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 Q8N9W7 124 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 DUX5Q96PT3 197 aa8.54□□□□□ -1.04
LINC00661-204ENST00000549354 UBR5O95071 2799 aaPredicted RBP8.53□□□□□ -1.04
LINC00661-204ENST00000549354 C9orf118A6NHY6 69 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 COX6B1P14854 86 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 OR1N2Q8NGR9 330 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 ZNF48Q96MX3 618 aaPredicted RBP8.53□□□□□ -1.04
LINC00661-204ENST00000549354 TRBV12-3P01733 135 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 ARL3P36405 182 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 SEC11AP67812 179 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 TMEM158Q8WZ71 300 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 CSTL1Q9H114 145 aa8.53□□□□□ -1.04
LINC00661-204ENST00000549354 CTSGP08311 255 aa8.52□□□□□ -1.04
LINC00661-204ENST00000549354 IGLV11-55A0A075B6I3 123 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 TRAV40A0A0B4J280 105 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 IGHV1-69DA0A0B4J2H0 117 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 MRPS12O15235 138 aaKnown RBP8.52□□□□□ -1.05
LINC00661-204ENST00000549354 IGHV1-69P01742 117 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 AMTNQ6UX39 209 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 A0A096LNT2 108 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 IGHV7-81A0A0B4J1V7 117 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 PPBPP02775 128 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 EDN2P20800 178 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 C16orf92Q96LL3 132 aa8.52□□□□□ -1.05
LINC00661-204ENST00000549354 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 SLC25A16P16260 332 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 MAP1LC3AQ9H492 121 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 SMAD5-AS1Q9Y6J3 95 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 HSD52Q0P140 79 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 LGALS9BQ3B8N2 356 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 ADAMTSL5Q6ZMM2 481 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 F8W735 103 aaPredicted RBP8.51□□□□□ -1.05
LINC00661-204ENST00000549354 MSMBP08118 114 aa8.51□□□□□ -1.05
LINC00661-204ENST00000549354 F5H697 171 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 H3BRM9 83 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 PF4V1P10720 104 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 FABP2P12104 132 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 RPL7P18124 248 aaKnown RBP8.5□□□□□ -1.05
LINC00661-204ENST00000549354 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
LINC00661-204ENST00000549354 PIFOQ8TCI5 191 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 K7EP34 96 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 GATA3P23771 443 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 Q6AWC8 147 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 GTSF1LQ9H1H1 148 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
LINC00661-204ENST00000549354 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 WI2-2373I1.2A0A1W2PRP0 233 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 ZNF493Q6ZR52 646 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
LINC00661-204ENST00000549354 TEX48A0A1B0GUV7 120 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 B4DSR2 109 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 IGHG4P01861 327 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 SMIM13P0DJ93 91 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 RNF185Q96GF1 192 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 CHAC1Q9BUX1 264 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 ZNF502Q8TBZ5 544 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 AGPAT4-IT1Q9H0P7 198 aa8.49□□□□□ -1.05
LINC00661-204ENST00000549354 A0A1B0GW15 77 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 FABP5P3A8MUU1 101 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 RNASE4P34096 147 aaKnown RBP8.48□□□□□ -1.05
LINC00661-204ENST00000549354 CRIP2P52943 208 aaPredicted RBP8.48□□□□□ -1.05
LINC00661-204ENST00000549354 TMEM78Q5T7P6 136 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 UFSP1Q6NVU6 142 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 Q6ZS46 218 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 LYPD1Q8N2G4 141 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 C5orf56Q8N8D9 126 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 FAM110DQ8TAY7 271 aaPredicted RBP8.48□□□□□ -1.05
LINC00661-204ENST00000549354 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 SMIM17P0DL12 118 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 BMI1P35226 326 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 ODF1Q14990 250 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 UNQ9165/PRO28630Q6UXU0 137 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 MAPKAPK5-AS1Q8N8E1 139 aa8.48□□□□□ -1.05
LINC00661-204ENST00000549354 JPT2Q9H910 190 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms