RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 A8MTW9 85 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 SNAI2O43623 268 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 PF4P02776 101 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 FRMD6-AS1P0C7T7 363 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 SMIM6P0DI80 62 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 PRB4P10163 310 aaPredicted RBP10.03□□□□□ -0.8
PTCH1-215ENST00000547672 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 INSL3P51460 131 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 C20orf144Q9BQM9 153 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
PTCH1-215ENST00000547672 NUTF2P61970 127 aaKnown RBP10.02□□□□□ -0.81
PTCH1-215ENST00000547672 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
PTCH1-215ENST00000547672 TDRG1Q3Y452 100 aa10.02□□□□□ -0.81
PTCH1-215ENST00000547672 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
PTCH1-215ENST00000547672 NAGKQ9UJ70 344 aa10.02□□□□□ -0.81
PTCH1-215ENST00000547672 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
PTCH1-215ENST00000547672 OR11H12B2RN74 326 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 H3BMM0 161 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 SAP30O75446 220 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 FABP4P15090 132 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 CD33P20138 364 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 PMCHP20382 165 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 SAMD10Q9BYL1 202 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 PHLDA3Q9Y5J5 127 aa10.01□□□□□ -0.81
PTCH1-215ENST00000547672 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 J3KRW8 73 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 RAB4AP20338 218 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 ANXA2RQ3ZCQ2 193 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 ORMDL3Q8N138 153 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 C18orf32Q8TCD1 76 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 CHCHD1Q96BP2 118 aaKnown RBP10□□□□□ -0.81
PTCH1-215ENST00000547672 HIST1H2BLQ99880 126 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 MAP6D1Q9H9H5 199 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 ZNF256Q9Y2P7 627 aaPredicted RBP10□□□□□ -0.81
PTCH1-215ENST00000547672 SELENOKQ9Y6D0 94 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 OTOGQ6ZRI0 2925 aa10□□□□□ -0.81
PTCH1-215ENST00000547672 CSMD1Q96PZ7 3565 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 TRGV11A0A075B6L2 103 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 TRAV12-3A0A0B4J271 114 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-215ENST00000547672 SERF1AO75920 110 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 IGLV1-51P01701 117 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 PRR9Q5T870 116 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 GFI1BQ5VTD9 330 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 STHQ8IWL8 128 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 LINC00518Q8N0U6 118 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 SYT8Q8NBV8 401 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 OR10D4PQ8NGN7 298 aa9.99□□□□□ -0.81
PTCH1-215ENST00000547672 MCRIP2Q9BUT9 160 aaKnown RBP9.99□□□□□ -0.81
PTCH1-215ENST00000547672 IGHV1OR15-1A0A075B7D0 117 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 PPP1R17O96001 155 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 CKS2P33552 79 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 DEFB1P60022 68 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 U3KQK5 164 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 AKAP9Q99996 3911 aa9.98□□□□□ -0.81
PTCH1-215ENST00000547672 MTORP42345 2549 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 H3BVH4 76 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 HSBP1O75506 76 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 IGKV3-20P01619 116 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 CD7P09564 240 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 MUC21Q5SSG8 566 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 TMEM256Q8N2U0 113 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 PRELID3AQ96N28 172 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 SCRT2Q9NQ03 307 aa9.97□□□□□ -0.81
PTCH1-215ENST00000547672 LINC00614P0C842 121 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 SPINK13Q1W4C9 94 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 C9orf66Q5T8R8 295 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 NIT1Q86X76 327 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 LINC00482Q8N8I6 264 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 PRSS3P2Q8NHM4 247 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 MRAP2Q96G30 205 aa9.96□□□□□ -0.82
PTCH1-215ENST00000547672 IFITM10A6NMD0 228 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 M0R2Z0 102 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 INSP01308 110 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 SSTP61278 116 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 BEAN1Q3B7T3 259 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 MRPL51Q4U2R6 128 aaKnown RBP9.95□□□□□ -0.82
PTCH1-215ENST00000547672 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 AMN1Q8IY45 258 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 OR10AG1Q8NH19 301 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 AP1S3Q96PC3 154 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 C12orf57Q99622 126 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 CITED1Q99966 193 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
PTCH1-215ENST00000547672 GNRH2O43555 120 aa9.94□□□□□ -0.82
PTCH1-215ENST00000547672 NXPH4O95158 308 aa9.94□□□□□ -0.82
PTCH1-215ENST00000547672 AMTP48728 403 aa9.94□□□□□ -0.82
PTCH1-215ENST00000547672 RIPPLY3P57055 190 aa9.94□□□□□ -0.82
PTCH1-215ENST00000547672 PIK3CD-AS1Q5SR53 167 aa9.94□□□□□ -0.82
PTCH1-215ENST00000547672 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms