RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 HOXA5P20719 270 aa8.31□□□□□ -1.08
YBX3-217ENST00000546164 FHITP49789 147 aa8.31□□□□□ -1.08
YBX3-217ENST00000546164 DPPA3Q6W0C5 159 aa8.31□□□□□ -1.08
YBX3-217ENST00000546164 MBD3L1Q8WWY6 194 aa8.31□□□□□ -1.08
YBX3-217ENST00000546164 HIST1H2BAQ96A08 127 aa8.31□□□□□ -1.08
YBX3-217ENST00000546164 MUC4Q99102 2169 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 TRGV2A0A075B6R0 118 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 F6UZH7 168 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 PFDN1O60925 122 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 TPT1P13693 172 aaKnown RBP8.3□□□□□ -1.08
YBX3-217ENST00000546164 FAM3BP58499 235 aaPredicted RBP8.3□□□□□ -1.08
YBX3-217ENST00000546164 UBE2G2P60604 165 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 SAPCD1Q5SSQ6 148 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 TCEAL7Q9BRU2 100 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 SPXQ9BT56 116 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
YBX3-217ENST00000546164 TRAV26-1A0A087WT03 109 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 PEX7O00628 323 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 IFNA7P01567 189 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 PPT1P50897 306 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 OR5I1Q13606 314 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 TMEM183BQ1AE95 376 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 TMEM183AQ8IXX5 376 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 FAM213BQ8TBF2 198 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 RASL10AQ92737 203 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 HECTD4Q9Y4D8 3996 aa8.29□□□□□ -1.08
YBX3-217ENST00000546164 IGHV3-16A0A0C4DH30 117 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 GCGP01275 180 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 C1QBP02746 253 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
YBX3-217ENST00000546164 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
YBX3-217ENST00000546164 LGALSLQ3ZCW2 172 aaPredicted RBP8.28□□□□□ -1.08
YBX3-217ENST00000546164 ZFP69Q49AA0 526 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 PRNTQ86SH4 94 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 LINC00479Q96M42 142 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 SDF2L1Q9HCN8 221 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 MRPL16Q9NX20 251 aaKnown RBP8.28□□□□□ -1.08
YBX3-217ENST00000546164 NAGKQ9UJ70 344 aa8.28□□□□□ -1.08
YBX3-217ENST00000546164 TRAV34A0A0B4J273 112 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 GNRH2O43555 120 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 NUDT3O95989 172 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 TYMSP04818 313 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 EIF5AL1Q6IS14 154 aaKnown RBP8.27□□□□□ -1.09
YBX3-217ENST00000546164 Q86TA4 180 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 C11orf21Q9P2W6 132 aa8.27□□□□□ -1.09
YBX3-217ENST00000546164 TRBV6-1A0A0K0K1D8 114 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 M0R2P5 195 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 H2AFB1P0C5Y9 115 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 RAB5CP51148 216 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 SLAQ13239 276 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 AKAP14Q86UN6 197 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 FMC1Q96HJ9 113 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 ZFP30Q9Y2G7 519 aa8.26□□□□□ -1.09
YBX3-217ENST00000546164 TRAV1-1A0A0B4J248 108 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 A0A0J9YY99 117 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 PAGE4O60829 102 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 CCL18P55774 89 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 FHL2Q14192 279 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 CST9LP1Q5W188 147 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 Q6ZR54 194 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 SLC51BQ86UW2 128 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 PRO0255Q9UI72 69 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 NACAE9PAV3 2078 aa8.25□□□□□ -1.09
YBX3-217ENST00000546164 FABP5P3A8MUU1 101 aa8.24□□□□□ -1.09
YBX3-217ENST00000546164 SULT1A2P50226 295 aa8.24□□□□□ -1.09
YBX3-217ENST00000546164 ZNRF2Q8NHG8 242 aa8.24□□□□□ -1.09
YBX3-217ENST00000546164 PTH2Q96A98 100 aa8.24□□□□□ -1.09
YBX3-217ENST00000546164 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
YBX3-217ENST00000546164 DYNC1H1Q14204 4646 aaKnown RBP8.24□□□□□ -1.09
YBX3-217ENST00000546164 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
YBX3-217ENST00000546164 A0A096LPF7 62 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 TRAV4A0A0B4J268 109 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 LTAP01374 205 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 AKR1C3P42330 323 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 CRYBA4P53673 196 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 UBE2G1P62253 170 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 C9orf62Q8N4C0 152 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 ZNF479Q96JC4 524 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 C9orf85Q96MD7 179 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 UPK3BQ9BT76 320 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 HHLA3Q9XRX5 114 aa8.23□□□□□ -1.09
YBX3-217ENST00000546164 hCG_2014768A0A024R1R8 64 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 IGKV3D-20A0A0C4DH25 116 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 A0A1B0GV50 99 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 PAX4O43316 350 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 S100A9P06702 114 aaKnown RBP8.22□□□□□ -1.09
YBX3-217ENST00000546164 RNASE3P12724 160 aaKnown RBP8.22□□□□□ -1.09
YBX3-217ENST00000546164 CRIP1P50238 77 aa8.22□□□□□ -1.09
YBX3-217ENST00000546164 LINC00336Q6ZUF6 198 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms