RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SMAD5-AS1Q9Y6J3 95 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 ORMDL2Q53FV1 153 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 Q8TAT8 98 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 AGMATQ9BSE5 352 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 CLPSL1A2RUU4 121 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 RHODO00212 210 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 PAX4O43316 350 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 CCL18P55774 89 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 LINC00205P59089 165 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 SRSF1Q07955 248 aaKnown RBP eCLIP6.85□□□□□ -1.31
CLIP1-218ENST00000545889 ERCC8Q13216 396 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 KRTAP27-1Q3LI81 207 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 MORN3Q6PF18 240 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-218ENST00000545889 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 KLK5Q9Y337 293 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-218ENST00000545889 FRYQ5TBA9 3013 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 ID3Q02535 119 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 Q0VG73 95 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 VWC2Q2TAL6 325 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 IL17DQ8TAD2 202 aa6.85□□□□□ -1.31
CLIP1-218ENST00000545889 LINC00473A8K010 186 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 C9orf118A6NHY6 69 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 INS-IGF2F8WCM5 200 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 DEFB136Q30KP8 78 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 TREML4Q6UXN2 200 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 C11orf53Q8IXP5 236 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 ZNF843Q8N446 348 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 DEFB104AQ8WTQ1 72 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 A0A1W2PPI3 338 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 SIVA1O15304 175 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 GAGE6Q13070 117 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
CLIP1-218ENST00000545889 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
CLIP1-218ENST00000545889 ARHGAP32A7KAX9 2087 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 NDUFA4O00483 81 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 NDUFA3O95167 84 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 IGLV2-23P01705 113 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 YPEL3P61236 119 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-218ENST00000545889 GNB1LQ9BYB4 327 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 PLNP26678 52 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 IGHV4-38-2P0DP08 117 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 RNF183Q96D59 192 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 ZNF479Q96JC4 524 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 IGF2BP2-AS1Q96M15 143 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 HOXD3P31249 432 aaPredicted RBP6.83□□□□□ -1.32
CLIP1-218ENST00000545889 CTRLP40313 264 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 Q9HAA7 133 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 KAAG1Q9UBP8 84 aa6.83□□□□□ -1.32
CLIP1-218ENST00000545889 A0A087WWL8 130 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 A0A096LPF7 62 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 IGHV3-16A0A0C4DH30 117 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 LINC01549A6NIU2 74 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 C14orf178Q8N769 122 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-218ENST00000545889 BBC3Q96PG8 261 aaPredicted RBP6.82□□□□□ -1.32
CLIP1-218ENST00000545889 DMXL2Q8TDJ6 3036 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 ZFAND6Q6FIF0 208 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 CPAMD8Q8IZJ3 1885 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 TEX36Q5VZQ5 186 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 HIST2H2BCQ6DN03 193 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 RASL11AQ6T310 242 aa6.82□□□□□ -1.32
CLIP1-218ENST00000545889 IGKV1-6A0A0C4DH72 117 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 BOD1L1Q8NFC6 3051 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 VCYO14598 125 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 PRSS57Q6UWY2 283 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 LYPD6Q86Y78 171 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 WFDC11Q8NEX6 87 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 TRBV25-1A0A075B6N4 114 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 TRBV6-6A0A0A6YYG2 114 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 A0A0J9YY99 117 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 TSPAN13O95857 204 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 FBXL19-AS1Q494R0 122 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 KLK9Q9UKQ9 250 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 IGKV1OR2-108A0A075B7D4 117 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 SYS1-DBNDD2H3BUS1 97 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 TCRAP04437 139 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 RNASE2P10153 161 aaKnown RBP6.81□□□□□ -1.32
CLIP1-218ENST00000545889 CFPP27918 469 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 RASL10AQ92737 203 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 LIME1Q9H400 295 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 TP53TG3Q9ULZ0 132 aa6.81□□□□□ -1.32
CLIP1-218ENST00000545889 A0A1W2PPM0 123 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-218ENST00000545889 HBDP02042 147 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 LGALS1P09382 135 aaKnown RBP6.8□□□□□ -1.32
CLIP1-218ENST00000545889 SPART-AS1P0CW21 52 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 MLANAQ16655 118 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 TMEM190Q8WZ59 177 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 BLCAPP62952 87 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 SPATA31B1PQ5VZV4 182 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 AMTNQ6UX39 209 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 ANAPC10Q9UM13 185 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 ACANP16112 2415 aa6.8□□□□□ -1.32
CLIP1-218ENST00000545889 HECTD1Q9ULT8 2610 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms