RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 DEFB1P60022 68 aa10.23□□□□□ -0.77
TUBGCP2-210ENST00000543663 SPINK13Q1W4C9 94 aa10.23□□□□□ -0.77
TUBGCP2-210ENST00000543663 LINC01549A6NIU2 74 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 BRWD1-AS2P59051 145 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 C2orf66Q6UXQ4 117 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 ANAPC13Q9BS18 74 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 DPH3P1Q9H4G8 78 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 ADARB2-AS1A8MUL3 147 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 SAP30O75446 220 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 GATA4P43694 442 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 TEX29Q8N6K0 151 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 TRAV13-1A0A0B4J241 112 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 ITGB1BP1O14713 200 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 EGR2P11161 476 aaPredicted RBP10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 PAX1P15863 534 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 FAM231DQ6ZW35 169 aa10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 TSSC4Q9Y5U2 329 aaPredicted RBP10.22□□□□□ -0.77
TUBGCP2-210ENST00000543663 C9JAW5 83 aa10.21□□□□□ -0.77
TUBGCP2-210ENST00000543663 DTX2Q86UW9 622 aa10.21□□□□□ -0.77
TUBGCP2-210ENST00000543663 DSCAMO60469 2012 aa10.21□□□□□ -0.77
TUBGCP2-210ENST00000543663 GNLYP22749 145 aa10.21□□□□□ -0.77
TUBGCP2-210ENST00000543663 COX8AP10176 69 aa10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 PLNP26678 52 aa10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 SRSF8Q9BRL6 282 aaKnown RBP10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 K7ENP7 123 aa10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 ZNF747Q9BV97 191 aa10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 TP53TG1Q9Y2A0 90 aa10.21□□□□□ -0.78
TUBGCP2-210ENST00000543663 C11orf1Q9H5F2 150 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 OVOL1O14753 267 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 IGKV1-17P01599 117 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 FOXE3Q13461 319 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 ZNF492Q9P255 531 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 C1orf229Q6ZS94 237 aaPredicted RBP10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 GTSF1Q8WW33 167 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 NCOR1P1Q9H4R4 102 aa10.2□□□□□ -0.78
TUBGCP2-210ENST00000543663 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 IGHV3-38A0A0C4DH36 116 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 PRSS47A8MTI9 375 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 C8orf86Q6ZUL3 223 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 FAM167A-AS1Q96KT0 104 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 GFRA4Q9GZZ7 299 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 SMPXQ9UHP9 88 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 ANXA2RQ3ZCQ2 193 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 C9orf139Q6ZV77 190 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
TUBGCP2-210ENST00000543663 KALRNO60229 2985 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 TRAV8-3A0A0A6YYJ7 113 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 NDUFS8O00217 210 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 SH2D6Q7Z4S9 175 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 CHCHD5Q9BSY4 110 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 STHQ8IWL8 128 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 C9orf118A6NHY6 69 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 PRSS46E5RG02 174 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 DLX4Q92988 240 aaPredicted RBP10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 TMEM101Q96IK0 257 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 RNF5Q99942 180 aa10.18□□□□□ -0.78
TUBGCP2-210ENST00000543663 SPINK8P0C7L1 97 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 PRADC1Q9BSG0 188 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 VCYO14598 125 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 GNRH2O43555 120 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 PF4P02776 101 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 DEFB131AP59861 70 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 PDE6HQ13956 83 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 POU2AF1Q16633 256 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 TNRC6BQ9UPQ9 1833 aaKnown RBP10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 H3BRM9 83 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 M0R2P5 195 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 CT83Q5H943 113 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 Q8NA96 180 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 AGPAT4-IT1Q9H0P7 198 aa10.17□□□□□ -0.78
TUBGCP2-210ENST00000543663 PRRC2AP48634 2157 aaKnown RBP10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 HLA-DRB4P13762 266 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 HLA-DRB4X5D2U9 266 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 H3BRN7 92 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 LINC00158P58513 81 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 CFHR3Q02985 330 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 LINC00322Q6ZN03 302 aaPredicted RBP10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 LTAP01374 205 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 MINOS1Q5TGZ0 78 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 PRSS22Q9GZN4 317 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 MINOS1-NBL1R4GNA1 71 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 TRGV4A0A0C4DH28 118 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 XCL2Q9UBD3 114 aa10.16□□□□□ -0.78
TUBGCP2-210ENST00000543663 RPL35AP18077 110 aaKnown RBP10.15□□□□□ -0.78
TUBGCP2-210ENST00000543663 ZNF503Q96F45 646 aa10.15□□□□□ -0.78
TUBGCP2-210ENST00000543663 WIPF2Q8TF74 440 aaPredicted RBP10.15□□□□□ -0.78
TUBGCP2-210ENST00000543663 M0R1W7 72 aa10.14□□□□□ -0.79
TUBGCP2-210ENST00000543663 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
TUBGCP2-210ENST00000543663 THAP8Q8NA92 274 aa10.14□□□□□ -0.79
TUBGCP2-210ENST00000543663 CFHR4Q92496 578 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms