RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 TMEM75Q8N9X5 138 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
SFSWAP-210ENST00000541286 NBR2O15453 112 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 EVI2AP22794 236 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 GATA3P23771 443 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 CRIP1P50238 77 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 TMEM189A5PLL7 270 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 ANXA2RQ3ZCQ2 193 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 DPM3Q9P2X0 92 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 OR5A1Q8NGJ0 315 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 PRELID3AQ96N28 172 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 VGLL1Q99990 258 aa11.11□□□□□ -0.63
SFSWAP-210ENST00000541286 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 ORM1P02763 201 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 TWIST1Q15672 202 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 CT83Q5H943 113 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 C8orf31Q8N9H6 132 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 MSMBP08118 114 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 LY6G5BQ8NDX9 201 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 IFI27L1Q96BM0 104 aa11.1□□□□□ -0.63
SFSWAP-210ENST00000541286 TMEM160Q9NX00 188 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 HAX1O00165 279 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 IGHV4-31P0DP07 118 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 HOXB4P17483 251 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 ECSCRQ19T08 205 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 GEMIN7Q9H840 131 aaKnown RBP11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 C2CD3Q4AC94 2353 aa11.09□□□□□ -0.63
SFSWAP-210ENST00000541286 GATA1P15976 413 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 HIST2H2BDQ6DRA6 164 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 H3BRN7 92 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 SH2D1AO60880 128 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 BEX4Q9NWD9 120 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
SFSWAP-210ENST00000541286 CENPVL3A0A0U1RRI6 287 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 A0A1B0GWB2 263 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 CKS2P33552 79 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 MFAP4P55083 255 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 NDPQ00604 133 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 SPANXB1Q9NS25 103 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 C21orf62Q9NYP8 219 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 J3KRW8 73 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 NPYP01303 97 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 SAA4P35542 130 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 TMEM219Q86XT9 240 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 PTH2Q96A98 100 aa11.07□□□□□ -0.64
SFSWAP-210ENST00000541286 SS18L2Q9UHA2 77 aa11.06□□□□□ -0.64
SFSWAP-210ENST00000541286 ERCC8Q13216 396 aa11.06□□□□□ -0.64
SFSWAP-210ENST00000541286 C5orf64Q2M2E5 130 aa11.06□□□□□ -0.64
SFSWAP-210ENST00000541286 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 PVRIGQ6DKI7 326 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 OR4X2Q8NGF9 303 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 MAPKAPK5-AS1Q8N8E1 139 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 OR9G4Q8NGQ1 327 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 ZNF418Q8TF45 676 aaPredicted RBP11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 FOXC2Q99958 501 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 B4DSR2 109 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 LY6EQ16553 131 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
SFSWAP-210ENST00000541286 HBDP02042 147 aa11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 PRTN3P24158 256 aa11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 LEPP41159 167 aa11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 MRPL51Q4U2R6 128 aaKnown RBP11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 FANCD2OSQ96PS1 177 aa11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 SYT8Q8NBV8 401 aa11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 AJUBAQ96IF1 538 aa11.04□□□□□ -0.64
SFSWAP-210ENST00000541286 SMIM17P0DL12 118 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 SLC25A16P16260 332 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 NDUFA3O95167 84 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 MT-ATP8P03928 68 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 KRTAP1-1Q07627 177 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 LINC00527Q9UJ94 153 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 IGLL5B9A064 214 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 PAX8Q06710 450 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 LGALS9BQ3B8N2 356 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 GAGE13Q4V321 117 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 LGALS9CQ6DKI2 356 aa11.03□□□□□ -0.64
SFSWAP-210ENST00000541286 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.64
SFSWAP-210ENST00000541286 HIST1H4GQ99525 98 aa11.02□□□□□ -0.64
SFSWAP-210ENST00000541286 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
SFSWAP-210ENST00000541286 LY6LH3BQJ8 138 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 J3QR89 54 aa11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 RPL7P18124 248 aaKnown RBP11.01□□□□□ -0.65
SFSWAP-210ENST00000541286 FAM104BQ5XKR9 115 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms