RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 NXT2Q9NPJ8 142 aaKnown RBP7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 HIF1ANQ9NWT6 349 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 CYSLTR1Q9Y271 337 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 TSSC4Q9Y5U2 329 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 Q8N8P6 123 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 HIST1H4GQ99525 98 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 NOTCH3Q9UM47 2321 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 MUC4Q99102 2169 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 IGLL5B9A064 214 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 SRD5A1P18405 259 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 COX8CQ7Z4L0 72 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 S100A7AQ86SG5 101 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 Q8N6K4 173 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 C14orf178Q8N769 122 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 CNFNQ9BYD5 112 aa7.92□□□□□ -1.14
CDC42SE1-207ENST00000540998 TGFAP01135 160 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 TCF15Q12870 199 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 LAGE3Q14657 143 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 TMEM78Q5T7P6 136 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 ZNF479Q96JC4 524 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 MGPP08493 103 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 AZU1P20160 251 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 OR5A1Q8NGJ0 315 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 MYOZ3Q8TDC0 251 aa7.91□□□□□ -1.14
CDC42SE1-207ENST00000540998 PRSS29PA6NIE9 313 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 EDN2P20800 178 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 SAA4P35542 130 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 ATP5G2Q06055 141 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 C12orf74Q32Q52 190 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 UNQ9165/PRO28630Q6UXU0 137 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 TIMD4Q96H15 378 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 KLHL30-AS1Q8NEE0 82 aa7.9□□□□□ -1.14
CDC42SE1-207ENST00000540998 IGHV3-11P01762 117 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 VKORC1Q9BQB6 163 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 RPL11P62913 178 aaKnown RBP7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 AJUBAQ96IF1 538 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 C16orf92Q96LL3 132 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 ZNF48Q96MX3 618 aaPredicted RBP7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 JPT2Q9H910 190 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 GNRH2O43555 120 aa7.89□□□□□ -1.15
CDC42SE1-207ENST00000540998 A0A087WX48 190 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 E9PLD3 99 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 SAMD13Q5VXD3 122 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 SPANXB1Q9NS25 103 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 BRD3OSQ6XYD6 125 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 RASL10AQ92737 203 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 SCGB3A1Q96QR1 104 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 SPAG8Q99932 426 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 TM2D2Q9BX73 214 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 HIGD1BQ9P298 99 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 CFAP46Q8IYW2 2715 aa7.88□□□□□ -1.15
CDC42SE1-207ENST00000540998 M0R1W7 72 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 ATP5LO75964 103 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 HLA-DRB4P13762 266 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 ADORA2A-AS1P86434 159 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 HLA-DRB4X5D2U9 266 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 CCDC144NLQ6NUI1 221 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 FOXI2Q6ZQN5 318 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 PTH2Q96A98 100 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 UBTD1Q9HAC8 227 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 S100A4P26447 101 aaKnown RBP7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 ARL3P36405 182 aa7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 CD300EQ496F6 205 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 FAM110DQ8TAY7 271 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE1-207ENST00000540998 SETD2Q9BYW2 2564 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 RNASE4P34096 147 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 METTL26Q96S19 204 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 CHTOPQ9Y3Y2 248 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 LGALS1P09382 135 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 ANXA2RQ3ZCQ2 193 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 ZFP2Q6ZN57 461 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 GPHB5Q86YW7 130 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 PRADC1Q9BSG0 188 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 SIRPDQ9H106 197 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 C2CD3Q4AC94 2353 aa7.86□□□□□ -1.15
CDC42SE1-207ENST00000540998 TRBV7-3A0A075B6L6 115 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 OR11H12B2RN74 326 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 DUSP14O95147 198 aaKnown RBP7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 SLC25A16P16260 332 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 RPL39P62891 51 aaKnown RBP7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 SRSF1Q07955 248 aaKnown RBP eCLIP7.85□□□□□ -1.152e-6■■□□□ 11.8
CDC42SE1-207ENST00000540998 LY6EQ16553 131 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 MORN3Q6PF18 240 aaPredicted RBP7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 OR11H1Q8NG94 326 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 OR11H2Q8NH07 326 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 PGPEP1Q9NXJ5 209 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 MYO9AB2RTY4 2548 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 APOMO95445 188 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 C11orf71Q6IPW1 123 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 SPOCK3Q9BQ16 436 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 BPESC1Q9GZL8 116 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 TLN2Q9Y4G6 2542 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 MXRA5Q9NR99 2828 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 A0A087WWL8 130 aa7.85□□□□□ -1.15
CDC42SE1-207ENST00000540998 GAGE12HA6NDE8 117 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms