RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 C8orf86Q6ZUL3 223 aa15.52■□□□□ 0.07
TMEM260-203ENST00000539559 A0A087WX48 190 aa15.51■□□□□ 0.07
TMEM260-203ENST00000539559 E9PLD3 99 aa15.51■□□□□ 0.07
TMEM260-203ENST00000539559 M0R381 172 aa15.51■□□□□ 0.07
TMEM260-203ENST00000539559 SMPXQ9UHP9 88 aa15.51■□□□□ 0.07
TMEM260-203ENST00000539559 ETDBQ3ZM63 59 aa15.5■□□□□ 0.07
TMEM260-203ENST00000539559 SMAGPQ0VAQ4 97 aa15.5■□□□□ 0.07
TMEM260-203ENST00000539559 TSSC4Q9Y5U2 329 aaPredicted RBP15.5■□□□□ 0.07
TMEM260-203ENST00000539559 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.49■□□□□ 0.07
TMEM260-203ENST00000539559 AZU1P20160 251 aa15.49■□□□□ 0.07
TMEM260-203ENST00000539559 GNLYP22749 145 aa15.49■□□□□ 0.07
TMEM260-203ENST00000539559 SAMD13Q5VXD3 122 aa15.49■□□□□ 0.07
TMEM260-203ENST00000539559 C11orf71Q6IPW1 123 aa15.49■□□□□ 0.07
TMEM260-203ENST00000539559 FOXI2Q6ZQN5 318 aa15.49■□□□□ 0.07
TMEM260-203ENST00000539559 FAM110DQ8TAY7 271 aaPredicted RBP15.49■□□□□ 0.07
TMEM260-203ENST00000539559 RPL39LQ96EH5 51 aaKnown RBP15.49■□□□□ 0.07
TMEM260-203ENST00000539559 SLC50A1Q9BRV3 221 aa15.49■□□□□ 0.07
TMEM260-203ENST00000539559 RBAKDNA6NC62 111 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 CYSLTR1Q9Y271 337 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 PKD1L2Q7Z442 2459 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 HIVEP3Q5T1R4 2406 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 SRSF1Q07955 248 aaKnown RBP eCLIP15.48■□□□□ 0.07
TMEM260-203ENST00000539559 EBI3Q14213 229 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 SFTA2Q6UW10 78 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 ITLN2Q8WWU7 325 aaPredicted RBP15.48■□□□□ 0.07
TMEM260-203ENST00000539559 C20orf173Q96LM9 149 aa15.48■□□□□ 0.07
TMEM260-203ENST00000539559 SPANXB1Q9NS25 103 aaPredicted RBP15.48■□□□□ 0.07
TMEM260-203ENST00000539559 INSL3P51460 131 aa15.47■□□□□ 0.07
TMEM260-203ENST00000539559 HIF1ANQ9NWT6 349 aa15.46■□□□□ 0.07
TMEM260-203ENST00000539559 COL12A1Q99715 3063 aa15.46■□□□□ 0.07
TMEM260-203ENST00000539559 C16orf92Q96LL3 132 aa15.46■□□□□ 0.07
TMEM260-203ENST00000539559 SCGB3A1Q96QR1 104 aa15.46■□□□□ 0.07
TMEM260-203ENST00000539559 SMIM2Q9BVW6 85 aa15.46■□□□□ 0.07
TMEM260-203ENST00000539559 VPS13CQ709C8 3753 aa15.45■□□□□ 0.06
TMEM260-203ENST00000539559 TMEM219Q86XT9 240 aa15.45■□□□□ 0.06
TMEM260-203ENST00000539559 C14orf178Q8N769 122 aaPredicted RBP15.45■□□□□ 0.06
TMEM260-203ENST00000539559 METTL26Q96S19 204 aa15.45■□□□□ 0.06
TMEM260-203ENST00000539559 IGKV3-7A0A075B6H7 116 aa15.44■□□□□ 0.06
TMEM260-203ENST00000539559 CHTOPQ9Y3Y2 248 aaKnown RBP15.44■□□□□ 0.06
TMEM260-203ENST00000539559 TRBV7-3A0A075B6L6 115 aa15.44■□□□□ 0.06
TMEM260-203ENST00000539559 F8VRH5 84 aa15.44■□□□□ 0.06
TMEM260-203ENST00000539559 AJUBAQ96IF1 538 aa15.44■□□□□ 0.06
TMEM260-203ENST00000539559 MGPP08493 103 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 SAA4P35542 130 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 GLMPQ8WWB7 406 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 RASL10AQ92737 203 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 SPAG8Q99932 426 aaPredicted RBP15.43■□□□□ 0.06
TMEM260-203ENST00000539559 IGHV3OR16-10A0A075B7F0 116 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 OR11H12B2RN74 326 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 H7C1H1 209 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 PLNP26678 52 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 PSMG4Q5JS54 123 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 OR11H1Q8NG94 326 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 OR11H2Q8NH07 326 aa15.43■□□□□ 0.06
TMEM260-203ENST00000539559 MAP1AP78559 2803 aaPredicted RBP15.42■□□□□ 0.06
TMEM260-203ENST00000539559 EMP1P54849 157 aa15.42■□□□□ 0.06
TMEM260-203ENST00000539559 MINOS1Q5TGZ0 78 aa15.42■□□□□ 0.06
TMEM260-203ENST00000539559 SIRPDQ9H106 197 aa15.42■□□□□ 0.06
TMEM260-203ENST00000539559 MINOS1-NBL1R4GNA1 71 aa15.42■□□□□ 0.06
TMEM260-203ENST00000539559 RAB9AP51151 201 aa15.42■□□□□ 0.06
TMEM260-203ENST00000539559 C9orf47Q6ZRZ4 202 aa15.42■□□□□ 0.06
TMEM260-203ENST00000539559 MYMXA0A1B0GTQ4 84 aa15.41■□□□□ 0.06
TMEM260-203ENST00000539559 A0A1W2PPR1 153 aa15.41■□□□□ 0.06
TMEM260-203ENST00000539559 GAGE12HA6NDE8 117 aa15.41■□□□□ 0.06
TMEM260-203ENST00000539559 RRN3P1Q2M238 152 aa15.41■□□□□ 0.06
TMEM260-203ENST00000539559 F6UB75 175 aa15.41■□□□□ 0.06
TMEM260-203ENST00000539559 SUMO2P61956 95 aaKnown RBP15.41■□□□□ 0.06
TMEM260-203ENST00000539559 EEF1AKMT3Q96AZ1 226 aa15.41■□□□□ 0.06
TMEM260-203ENST00000539559 PRSS47A8MTI9 375 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 F8W1H4 67 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 TRBV12-3P01733 135 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 S100A4P26447 101 aaKnown RBP15.4■□□□□ 0.06
TMEM260-203ENST00000539559 SIGMAR1Q99720 223 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 LGALS1P09382 135 aaKnown RBP15.4■□□□□ 0.06
TMEM260-203ENST00000539559 HLA-DRB4P13762 266 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 PLEKHB2Q96CS7 222 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 HLA-DRB4X5D2U9 266 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 OOSP1A8MZH6 123 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 ATP5G2Q06055 141 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 SPTAN1Q13813 2472 aaKnown RBP15.4■□□□□ 0.06
TMEM260-203ENST00000539559 GAGE13Q4V321 117 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 UNQ9165/PRO28630Q6UXU0 137 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 KLHL30-AS1Q8NEE0 82 aa15.4■□□□□ 0.06
TMEM260-203ENST00000539559 GNRH2O43555 120 aa15.39■□□□□ 0.05
TMEM260-203ENST00000539559 MORN3Q6PF18 240 aaPredicted RBP15.39■□□□□ 0.05
TMEM260-203ENST00000539559 NEXN-AS1Q8NBZ9 246 aa15.39■□□□□ 0.05
TMEM260-203ENST00000539559 PRADC1Q9BSG0 188 aa15.39■□□□□ 0.05
TMEM260-203ENST00000539559 UBTD1Q9HAC8 227 aa15.39■□□□□ 0.05
TMEM260-203ENST00000539559 IGHV4-4A0A075B6R2 117 aa15.39■□□□□ 0.05
TMEM260-203ENST00000539559 SCGB2A2Q13296 93 aa15.39■□□□□ 0.05
TMEM260-203ENST00000539559 CD300EQ496F6 205 aaPredicted RBP15.39■□□□□ 0.05
TMEM260-203ENST00000539559 TAL2Q16559 108 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 C2orf66Q6UXQ4 117 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 BAALCQ8WXS3 180 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 PGPEP1Q9NXJ5 209 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 PRO0461Q9UI25 63 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 PRSS29PA6NIE9 313 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 C19orf84I3L1E1 186 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 ANXA2RQ3ZCQ2 193 aa15.38■□□□□ 0.05
TMEM260-203ENST00000539559 TOMM6Q96B49 74 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms