RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 C15orf54Q8N8G6 183 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 OR2D3Q8NGH3 330 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 DAZAP1Q96EP5 407 aaKnown RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 ODF3Q96PU9 254 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 RPP21Q9H633 154 aaKnown RBP6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 TMEM242Q9NWH2 141 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 IL36BQ9NZH7 164 aa6.73□□□□□ -1.33
RTN4IP1-204ENST00000539449 TRAV12-3A0A0B4J271 114 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 GRIFINA4D1Z8 144 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 TMEM189A5PLL7 270 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 P01737 135 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 LEPP41159 167 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 FAM162BQ5T6X4 162 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 GFI1BQ5VTD9 330 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 TUBA4BQ9H853 241 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 BIN3Q9NQY0 253 aa6.72□□□□□ -1.33
RTN4IP1-204ENST00000539449 TRBV7-9A0A0J9YWB2 115 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 C7orf71A4D174 169 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 C3orf84H3BNL1 204 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 SPRY2O43597 315 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 SPINK4O60575 86 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 ZNF324O75467 553 aaPredicted RBP6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 ORM1P02763 201 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 PRM2P04554 102 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 GIG44P09565 113 aaPredicted RBP6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 CMC4P56277 68 aaPredicted RBP6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 ANXA2RQ3ZCQ2 193 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 MUC21Q5SSG8 566 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 Q6AWC8 147 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 NEU1Q99519 415 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 FAM110AQ9BQ89 295 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 PYGO2Q9BRQ0 406 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 DNAH7Q8WXX0 4024 aa6.71□□□□□ -1.34
RTN4IP1-204ENST00000539449 TRAV21A0A0B4J279 112 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 GNRH2O43555 120 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 CDKN1BP46527 198 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 STHQ8IWL8 128 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 NUP35Q8NFH5 326 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 TSKUQ8WUA8 353 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 CLUHP3Q96NS8 147 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 NAGKQ9UJ70 344 aa6.7□□□□□ -1.34
RTN4IP1-204ENST00000539449 MUC21A0A0G2JKD1 596 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 MUC21A0A140T8X8 626 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 A8MWL6 223 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 TSPOP30536 169 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 CT83Q5H943 113 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 C1orf158Q8N1D5 194 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 PGLYRP4Q96LB8 373 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 XCL2Q9UBD3 114 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 TP53TG3Q9ULZ0 132 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 MUC4Q99102 2169 aa6.69□□□□□ -1.34
RTN4IP1-204ENST00000539449 STAB2Q8WWQ8 2551 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 TRBV24-1A0A075B6N3 115 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 LCE6AA0A183 80 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 K7EIL1 84 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 IGLC6P0CF74 106 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 S100PP25815 95 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 EGFEM1PQ0D2K5 195 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 FAM210BQ96KR6 192 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 SRD5A3Q9H8P0 318 aa6.68□□□□□ -1.34
RTN4IP1-204ENST00000539449 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 TYMSP04818 313 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 SSTP61278 116 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 DEFB121Q5J5C9 76 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 KCNIP4Q6PIL6 250 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 GTSCR1Q86UQ5 136 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 NAT8BQ9UHF3 227 aa6.67□□□□□ -1.34
RTN4IP1-204ENST00000539449 IGHV1OR15-1A0A075B7D0 117 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 ARMS2P0C7Q2 107 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 RNASE3P12724 160 aaKnown RBP6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 RAB5AP20339 215 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 CASC10Q5T4H9 136 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 FER1L6-AS1Q8NA97 138 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 CSNK1G2-AS1Q8NCQ2 148 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 TPPP3Q9BW30 176 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 MDFICQ9P1T7 246 aa6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 TIMM8BQ9Y5J9 83 aaPredicted RBP6.66□□□□□ -1.34
RTN4IP1-204ENST00000539449 TRAV9-1A0A075B6T8 112 aa6.65□□□□□ -1.34
RTN4IP1-204ENST00000539449 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
RTN4IP1-204ENST00000539449 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
RTN4IP1-204ENST00000539449 A0A1B0GXF2 115 aa6.65□□□□□ -1.34
RTN4IP1-204ENST00000539449 FAM231BA6NCW3 169 aa6.65□□□□□ -1.34
RTN4IP1-204ENST00000539449 H3BVH4 76 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms