RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 OPRPNQ99935 248 aaPredicted RBP5.44□□□□□ -1.54
SORT1-209ENST00000538502 DAD1P61803 113 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 BAALCQ8WXS3 180 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 TNRC6AQ8NDV7 1962 aaKnown RBP5.44□□□□□ -1.54
SORT1-209ENST00000538502 MAP1BP46821 2468 aaKnown RBP5.44□□□□□ -1.54
SORT1-209ENST00000538502 LOXP28300 417 aaPredicted RBP5.44□□□□□ -1.54
SORT1-209ENST00000538502 CRYGCP07315 174 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 TDRG1Q3Y452 100 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 LRRK1Q38SD2 2015 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 IGLV3-9A0A075B6K5 115 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 PRB4P10163 310 aaPredicted RBP5.44□□□□□ -1.54
SORT1-209ENST00000538502 NPBQ8NG41 125 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 CABIN1Q9Y6J0 2220 aa5.44□□□□□ -1.54
SORT1-209ENST00000538502 E7EQL1 145 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 C3orf22Q8N5N4 141 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 WFDC9Q8NEX5 89 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 SND1-IT1Q9HBX3 110 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 PLA2G2EQ9NZK7 142 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 CRYGBP07316 175 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 ODF1Q14990 250 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 Q6ZR03 302 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 ELANEP08246 267 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 Q6ZS92 163 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 COX7B2Q8TF08 81 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 V9GYY9 64 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 NDUFA11Q86Y39 141 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 AGPAT4-IT1Q9H0P7 198 aa5.43□□□□□ -1.54
SORT1-209ENST00000538502 RSPO1Q2MKA7 263 aaPredicted RBP5.42□□□□□ -1.54
SORT1-209ENST00000538502 NDUFC1O43677 76 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 C9orf47Q6ZRZ4 202 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 TMEM61Q8N0U2 210 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 IGHV3-16A0A0C4DH30 117 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 WI2-2373I1.2A0A1W2PRP0 233 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 NDUFC2-KCTD14E9PQ53 114 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 NXPH4O95158 308 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 NREPQ16612 68 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 C11orf1Q9H5F2 150 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 LINC00173Q6ZV60 143 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 RNF183Q96D59 192 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 COLQQ9Y215 455 aaPredicted RBP5.42□□□□□ -1.54
SORT1-209ENST00000538502 NLRC5Q86WI3 1866 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 DEFB130BP0DP73 79 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 DEFB130AP0DP74 79 aa5.42□□□□□ -1.54
SORT1-209ENST00000538502 IGKV3D-7A0A0C4DH55 119 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 NDUFB1O75438 58 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 Q8N1Y9 231 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 GTSF1Q8WW33 167 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 TM2D2Q9BX73 214 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 MDFICQ9P1T7 246 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 IGHV3-38A0A0C4DH36 116 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 I3L2K1 104 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 MSMBP08118 114 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 XCL2Q9UBD3 114 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 DENND4AQ7Z401 1863 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 P0DMU3 169 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 FAM231AP0DMU4 169 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 FAM231CP0DMU5 169 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 FAM236DA0A1B0GTK5 79 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 C2orf70A6NJV1 201 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 K7EQD1 137 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 FAM236CP0DP71 79 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 MRPL55Q7Z7F7 128 aaKnown RBP5.41□□□□□ -1.54
SORT1-209ENST00000538502 FAM167A-AS1Q96KT0 104 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 A0A1B0GXF2 115 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 C19orf71A6NCJ1 209 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 LYPD6Q86Y78 171 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 MPDZO75970 2070 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 TRAV4A0A0B4J268 109 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 MIAQ16674 131 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 ARTNQ5T4W7 220 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 BRD3OSQ6XYD6 125 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 TPSG1Q9NRR2 321 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 ZNF318Q5VUA4 2279 aa5.41□□□□□ -1.54
SORT1-209ENST00000538502 FAM240AA0A1B0GVK7 77 aa5.4□□□□□ -1.54
SORT1-209ENST00000538502 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
SORT1-209ENST00000538502 C16orf74Q96GX8 76 aa5.4□□□□□ -1.54
SORT1-209ENST00000538502 PROK2Q9HC23 129 aa5.4□□□□□ -1.54
SORT1-209ENST00000538502 F5H768 121 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 GNRH2O43555 120 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 C16orf54Q6UWD8 224 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 MRPL36Q9P0J6 103 aaKnown RBP5.4□□□□□ -1.55
SORT1-209ENST00000538502 ZNRD1Q9P1U0 126 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 BRWD3Q6RI45 1802 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 TRAV12-2A0A075B6T6 113 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 IGFL3Q6UXB1 125 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 C17orf77Q96MU5 243 aa5.4□□□□□ -1.55
SORT1-209ENST00000538502 TCL1BO95988 128 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 LHBP01229 141 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 LRRC75A-AS1Q8N1F1 130 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 RPL39LQ96EH5 51 aaKnown RBP5.39□□□□□ -1.55
SORT1-209ENST00000538502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.39□□□□□ -1.55
SORT1-209ENST00000538502 IGKV2-29A2NJV5 120 aaPredicted RBP5.39□□□□□ -1.55
SORT1-209ENST00000538502 ANGP03950 147 aaKnown RBP5.39□□□□□ -1.55
SORT1-209ENST00000538502 CACNA1DQ01668 2161 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 FRMPD3Q5JV73 1810 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 IGLV11-55A0A075B6I3 123 aa5.39□□□□□ -1.55
SORT1-209ENST00000538502 COX7A2LO14548 114 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms