RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 COX8AP10176 69 aa18.87■□□□□ 0.61
RAB40C-204ENST00000538492 NXT2Q9NPJ8 142 aaKnown RBP18.87■□□□□ 0.61
RAB40C-204ENST00000538492 LENEPQ9Y5L5 61 aa18.87■□□□□ 0.61
RAB40C-204ENST00000538492 OVOL1O14753 267 aa18.86■□□□□ 0.61
RAB40C-204ENST00000538492 CFHR3Q02985 330 aa18.86■□□□□ 0.61
RAB40C-204ENST00000538492 DEFB112Q30KQ8 113 aa18.86■□□□□ 0.61
RAB40C-204ENST00000538492 OR2K2Q8NGT1 345 aa18.86■□□□□ 0.61
RAB40C-204ENST00000538492 DAZ1Q9NQZ3 744 aaKnown RBP18.86■□□□□ 0.61
RAB40C-204ENST00000538492 KIR3DS1Q14943 382 aa18.85■□□□□ 0.61
RAB40C-204ENST00000538492 DKK2Q9UBU2 259 aa18.85■□□□□ 0.61
RAB40C-204ENST00000538492 ZNF462Q96JM2 2506 aa18.84■□□□□ 0.61
RAB40C-204ENST00000538492 C10orf99Q6UWK7 81 aa18.84■□□□□ 0.61
RAB40C-204ENST00000538492 LINC01546A6NGU7 62 aa18.84■□□□□ 0.61
RAB40C-204ENST00000538492 FCER1GP30273 86 aa18.84■□□□□ 0.61
RAB40C-204ENST00000538492 BVES-AS1Q5T3Y7 98 aa18.84■□□□□ 0.61
RAB40C-204ENST00000538492 COX11Q9Y6N1 276 aa18.84■□□□□ 0.61
RAB40C-204ENST00000538492 USP24Q9UPU5 2620 aa18.83■□□□□ 0.61
RAB40C-204ENST00000538492 RNASE4P34096 147 aaKnown RBP18.83■□□□□ 0.6
RAB40C-204ENST00000538492 DSCR9P59020 149 aa18.83■□□□□ 0.6
RAB40C-204ENST00000538492 PEF1Q9UBV8 284 aaKnown RBP18.83■□□□□ 0.6
RAB40C-204ENST00000538492 LRRK2Q5S007 2527 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 TRAV21A0A0B4J279 112 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 M0R381 172 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 GATA3P23771 443 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 NRACQ8N912 160 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 TMEM158Q8WZ71 300 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 IGHV4-4A0A075B6R2 117 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 C2orf91Q6ZV80 131 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 Q8N8P6 123 aa18.82■□□□□ 0.6
RAB40C-204ENST00000538492 IGLV2-18A0A075B6J9 118 aa18.81■□□□□ 0.6
RAB40C-204ENST00000538492 LINC01356Q8N9X3 169 aa18.81■□□□□ 0.6
RAB40C-204ENST00000538492 ORAOV1Q8WV07 137 aa18.81■□□□□ 0.6
RAB40C-204ENST00000538492 DOPEY2Q9Y3R5 2298 aa18.81■□□□□ 0.6
RAB40C-204ENST00000538492 S100A4P26447 101 aaKnown RBP18.81■□□□□ 0.6
RAB40C-204ENST00000538492 SMPXQ9UHP9 88 aa18.81■□□□□ 0.6
RAB40C-204ENST00000538492 SLC25A16P16260 332 aa18.8■□□□□ 0.6
RAB40C-204ENST00000538492 ANXA2RQ3ZCQ2 193 aa18.8■□□□□ 0.6
RAB40C-204ENST00000538492 C12orf54Q6X4T0 127 aa18.8■□□□□ 0.6
RAB40C-204ENST00000538492 TGFAP01135 160 aa18.8■□□□□ 0.6
RAB40C-204ENST00000538492 ERASQ7Z444 233 aa18.79■□□□□ 0.6
RAB40C-204ENST00000538492 FGF6P10767 208 aa18.79■□□□□ 0.6
RAB40C-204ENST00000538492 PSMB8P28062 276 aa18.79■□□□□ 0.6
RAB40C-204ENST00000538492 A1L4Q6 167 aa18.78■□□□□ 0.6
RAB40C-204ENST00000538492 FAM19A4Q96LR4 140 aa18.78■□□□□ 0.6
RAB40C-204ENST00000538492 PRSS1P07477 247 aa18.78■□□□□ 0.6
RAB40C-204ENST00000538492 DPF1Q92782 380 aa18.78■□□□□ 0.6
RAB40C-204ENST00000538492 GNRH2O43555 120 aa18.77■□□□□ 0.6
RAB40C-204ENST00000538492 ASIPP42127 132 aa18.77■□□□□ 0.6
RAB40C-204ENST00000538492 WFDC12Q8WWY7 111 aa18.77■□□□□ 0.59
RAB40C-204ENST00000538492 A0A096LNT2 108 aa18.76■□□□□ 0.59
RAB40C-204ENST00000538492 CD5LO43866 347 aa18.76■□□□□ 0.59
RAB40C-204ENST00000538492 OR1N2Q8NGR9 330 aa18.76■□□□□ 0.59
RAB40C-204ENST00000538492 PHLDA3Q9Y5J5 127 aa18.76■□□□□ 0.59
RAB40C-204ENST00000538492 MXRA5Q9NR99 2828 aa18.76■□□□□ 0.59
RAB40C-204ENST00000538492 NMUP48645 174 aa18.75■□□□□ 0.59
RAB40C-204ENST00000538492 SMIM17P0DL12 118 aa18.75■□□□□ 0.59
RAB40C-204ENST00000538492 ODF1Q14990 250 aa18.75■□□□□ 0.59
RAB40C-204ENST00000538492 C14orf178Q8N769 122 aaPredicted RBP18.75■□□□□ 0.59
RAB40C-204ENST00000538492 CCL25O15444 150 aa18.74■□□□□ 0.59
RAB40C-204ENST00000538492 LAGE3Q14657 143 aa18.74■□□□□ 0.59
RAB40C-204ENST00000538492 PTTG1IPP53801 180 aa18.74■□□□□ 0.59
RAB40C-204ENST00000538492 BBC3Q96PG8 261 aaPredicted RBP18.74■□□□□ 0.59
RAB40C-204ENST00000538492 FOXC2Q99958 501 aa18.74■□□□□ 0.59
RAB40C-204ENST00000538492 K7EMT4 169 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 TAX1BP3O14907 124 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 COX6B1P14854 86 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 PCP2Q8IVA1 136 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 BOD1L2Q8IYS8 172 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 DEFB125Q8N687 156 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 DCANP1Q8TF63 244 aa18.73■□□□□ 0.59
RAB40C-204ENST00000538492 PTPN13Q12923 2485 aa18.72■□□□□ 0.59
RAB40C-204ENST00000538492 RNF223E7ERA6 249 aa18.72■□□□□ 0.59
RAB40C-204ENST00000538492 MRAP2Q96G30 205 aa18.72■□□□□ 0.59
RAB40C-204ENST00000538492 PRSS47A8MTI9 375 aa18.72■□□□□ 0.59
RAB40C-204ENST00000538492 APRG1Q8IVJ8 170 aa18.71■□□□□ 0.59
RAB40C-204ENST00000538492 RNASE3P12724 160 aaKnown RBP18.71■□□□□ 0.59
RAB40C-204ENST00000538492 ABCA12Q86UK0 2595 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 CBY3A6NI87 242 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 MGPP08493 103 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 ZNF580Q9UK33 172 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 C7orf71A4D174 169 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 ID1P41134 155 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 RPL39LQ96EH5 51 aaKnown RBP18.7■□□□□ 0.58
RAB40C-204ENST00000538492 DPH3P1Q9H4G8 78 aa18.7■□□□□ 0.58
RAB40C-204ENST00000538492 MUC4Q99102 2169 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 SRSF1Q07955 248 aaKnown RBP eCLIP18.69■□□□□ 0.58
RAB40C-204ENST00000538492 UBE2V1Q13404 147 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 TMEM97Q5BJF2 176 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 RASL10AQ92737 203 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 UBR5O95071 2799 aaPredicted RBP18.69■□□□□ 0.58
RAB40C-204ENST00000538492 SMIM2Q9BVW6 85 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 ZMAT4Q9H898 229 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 HHLA3Q9XRX5 114 aa18.69■□□□□ 0.58
RAB40C-204ENST00000538492 ZNF688P0C7X2 276 aa18.68■□□□□ 0.58
RAB40C-204ENST00000538492 VAMP3Q15836 100 aa18.68■□□□□ 0.58
RAB40C-204ENST00000538492 MYOZ3Q8TDC0 251 aa18.68■□□□□ 0.58
RAB40C-204ENST00000538492 J3QLI3 93 aa18.68■□□□□ 0.58
RAB40C-204ENST00000538492 IGKCP01834 107 aa18.68■□□□□ 0.58
RAB40C-204ENST00000538492 IGKV2D-26A0A0A0MRZ7 120 aa18.67■□□□□ 0.58
RAB40C-204ENST00000538492 TRBV7-9A0A0J9YWB2 115 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms