RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	TMEM189	A5PLL7	270 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CTRL	P40313	264 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CRIP1	P50238	77 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SYNJ2BP	P57105	145 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HIST1H1A	Q02539	215 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ERCC8	Q13216	396 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TCTEX1D4	Q5JR98	221 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983		Q71RC1	249 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GATD1	Q8NB37	220 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	KLHL30-AS1	Q8NEE0	82 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR8A1	Q8NGG7	326 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	DCANP1	Q8TF63	244 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GTSF1	Q8WW33	167 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	BORCS7	Q96B45	105 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	AGPAT4-IT1	Q9H0P7	198 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ITPR3	Q14573	2671 aa		4.12	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PDZD2	O15018	2839 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983		A0A1B0GUT8	65 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FABP5P3	A8MUU1	101 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983		K7EQG2	157 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LY6G6D	O95868	133 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	APCS	P02743	223 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SMIM6	P0DI80	62 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CRISP2	P16562	243 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	S100A2	P29034	98 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	AKR1D1	P51857	326 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RAB4B	P61018	213 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SNRPD3	P62318	126 aa	Known RBP	4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PAFAH1B2	P68402	229 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	RIG	Q13278	110 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR10J3	Q5JRS4	329 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LURAP1L	Q8IV03	231 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	APRG1	Q8IVJ8	170 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HIST3H2BB	Q8N257	126 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR11H1	Q8NG94	326 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR9G4	Q8NGQ1	327 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	OR1N2	Q8NGR9	330 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PGLYRP4	Q96LB8	373 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FAM19A4	Q96LR4	140 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ODF3	Q96PU9	254 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	MS4A6A	Q9H2W1	248 aa		4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.11	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HELZ2	Q9BYK8	2649 aa	Known RBP	4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRAV21	A0A0B4J279	112 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SPINK4	O60575	86 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IGLC6	P0CF74	106 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GZMB	P10144	247 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PRB4	P10163	310 aa	Predicted RBP	4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF80	P51504	273 aa	Predicted RBP	4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983		Q0VG73	95 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SLA	Q13239	276 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	DEFB136	Q30KP8	78 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	C18orf65	Q6ZTR6	163 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZFAND2A	Q8N6M9	145 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FER1L6-AS1	Q8NA97	138 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LINC01006	Q8NI28	216 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	DYNLRB2	Q8TF09	96 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CNFN	Q9BYD5	112 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	UNC79	Q9P2D8	2635 aa		4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ANK3	Q12955	4377 aa	Known RBP	4.1	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CELSR1	Q9NYQ6	3014 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IGKV3-7	A0A075B6H7	116 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TRAV25	A0A0B4J276	109 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983		A0A0J9YX75	114 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983		A0A1B0GUS0	222 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	IFITM10	A6NMD0	228 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	KLLN	B2CW77	178 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983		F2Z2F3	143 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	TCF21	O43680	179 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	DUSP14	O95147	198 aa	Known RBP	4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ORM1	P02763	201 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CSN3	P07498	182 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ARMS2	P0C7Q2	107 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FRMD6-AS1	P0C7T7	363 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF688	P0C7X2	276 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CD28	P10747	220 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ESD	P10768	282 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SRI	P30626	198 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LEP	P41159	167 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CAMP	P49913	170 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PSMG4	Q5JS54	123 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GDF5OS	Q5U4N7	250 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	GFI1B	Q5VTD9	330 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	EBLN2	Q6P2I7	272 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	FOXI2	Q6ZQN5	318 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	ZNF493	Q6ZR52	646 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	LINC00518	Q8N0U6	118 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	DLX4	Q92988	240 aa	Predicted RBP	4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	KCNS1	Q96KK3	526 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	PACRG	Q96M98	296 aa	Predicted RBP	4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	HIST1H2BL	Q99880	126 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SMR3A	Q99954	134 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	SIGLEC8	Q9NYZ4	499 aa		4.09	□□□□□ -1.75
NPIPB3-208	ENST00000537983	CCDC168	Q8NDH2	2452 aa		4.09	□□□□□ -1.76
NPIPB3-208	ENST00000537983	FLNA	P21333	2647 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	TMSB15B	A0A087X1C1	80 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	IGKV3D-20	A0A0C4DH25	116 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	GRIFIN	A4D1Z8	144 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983		A8MTW9	85 aa		4.08	□□□□□ -1.76
NPIPB3-208	ENST00000537983	INAFM1	C9JVW0	142 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms