RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 VAMP3Q15836 100 aa5.67□□□□□ -1.5
NECAP1-203ENST00000537796 BVES-AS1Q5T3Y7 98 aa5.67□□□□□ -1.5
NECAP1-203ENST00000537796 Q6AWC8 147 aa5.67□□□□□ -1.5
NECAP1-203ENST00000537796 TMEM158Q8WZ71 300 aa5.67□□□□□ -1.5
NECAP1-203ENST00000537796 IGHV7-4-1A0A0J9YVY3 117 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 C7orf71A4D174 169 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
NECAP1-203ENST00000537796 JPT2Q9H910 190 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 U3KQK5 164 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 NACAE9PAV3 2078 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 IGKV2D-26A0A0A0MRZ7 120 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 C2orf91Q6ZV80 131 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 RAB37Q96AX2 223 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 RPL39LQ96EH5 51 aaKnown RBP5.66□□□□□ -1.5
NECAP1-203ENST00000537796 RHPN1-AS1Q9BWJ2 59 aa5.66□□□□□ -1.5
NECAP1-203ENST00000537796 MSMBP08118 114 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 MGPP08493 103 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 KRTAP10-9P60411 292 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 GTSCR1Q86UQ5 136 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 FOXC2Q99958 501 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 MAP1LC3AQ9H492 121 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 COX11Q9Y6N1 276 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 APCP25054 2843 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 NOTCH2Q04721 2471 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 S100A4P26447 101 aaKnown RBP5.65□□□□□ -1.5
NECAP1-203ENST00000537796 DEFB112Q30KQ8 113 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 ANXA2RQ3ZCQ2 193 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 LINC01559Q495D7 138 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 SLC50A1Q9BRV3 221 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 MUC4Q99102 2169 aa5.65□□□□□ -1.5
NECAP1-203ENST00000537796 TRAV12-2A0A075B6T6 113 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 A0A1B0GW15 77 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 TAX1BP3O14907 124 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 TGFAP01135 160 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 PRM2P04554 102 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 GATD1Q8NB37 220 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 BBC3Q96PG8 261 aaPredicted RBP5.65□□□□□ -1.51
NECAP1-203ENST00000537796 NPFFR1Q9GZQ6 430 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 TMEM160Q9NX00 188 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 U3KQE9 123 aa5.65□□□□□ -1.51
NECAP1-203ENST00000537796 RPS20P60866 119 aaKnown RBP5.64□□□□□ -1.51
NECAP1-203ENST00000537796 C19orf54Q5BKX5 351 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 AMMECR1LQ6DCA0 310 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 OR2K2Q8NGT1 345 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 DUX3Q96PT4 197 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 ZNF688P0C7X2 276 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 RAB9AP51151 201 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 ZC2HC1BQ5TFG8 222 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 ZFAND2AQ8N6M9 145 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 FLNAP21333 2647 aaKnown RBP5.64□□□□□ -1.51
NECAP1-203ENST00000537796 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 A6NDX4 124 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 COX8AP10176 69 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 HTN1P15515 57 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 C21orf62-AS1Q17RA5 79 aa5.64□□□□□ -1.51
NECAP1-203ENST00000537796 TRAV8-6A0A0B4J262 113 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 RNF223E7ERA6 249 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 FGF6P10767 208 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 EMP1P54849 157 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 DEFB136Q30KP8 78 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 HIST2H2BCQ6DN03 193 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 C18orf65Q6ZTR6 163 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 COX8CQ7Z4L0 72 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 OR10J6PQ8NGY7 276 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 RNASE8Q8TDE3 154 aaKnown RBP5.63□□□□□ -1.51
NECAP1-203ENST00000537796 BEX4Q9NWD9 120 aaPredicted RBP5.63□□□□□ -1.51
NECAP1-203ENST00000537796 ITPR3Q14573 2671 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 A0A087WWL8 130 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 CD5LO43866 347 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 IGHG2P01859 326 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 SMIM17P0DL12 118 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 SFTPCP11686 197 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 LINC00477Q96M19 166 aa5.63□□□□□ -1.51
NECAP1-203ENST00000537796 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 NRACQ8N912 160 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 FAM223BA6NKX1 122 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 FAM223AQ8IWN6 122 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 MEGF9Q9H1U4 602 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 MRPL35Q9NZE8 188 aaKnown RBP5.62□□□□□ -1.51
NECAP1-203ENST00000537796 PHLDA3Q9Y5J5 127 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 TMEM8BA6NDV4 472 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 SOCS3O14543 225 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 SYNJ2BPP57105 145 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
NECAP1-203ENST00000537796 OR4C5Q8NGB2 326 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 KLK9Q9UKQ9 250 aa5.62□□□□□ -1.51
NECAP1-203ENST00000537796 ITPR2Q14571 2701 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 K7ERJ3 54 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 NDUFA4O00483 81 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 FCER1GP30273 86 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 GAGE1Q13065 139 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 ODF1Q14990 250 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 RNF151Q2KHN1 245 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 TMEM97Q5BJF2 176 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 PSMG4Q5JS54 123 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 FAM74A4Q5TZK3 123 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 C11orf44Q8N8P7 122 aa5.61□□□□□ -1.51
NECAP1-203ENST00000537796 RBAKDNA6NC62 111 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms