RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.76
SMG6-203ENST00000536871 LCNL1Q6ZST4 164 aa10.27□□□□□ -0.76
SMG6-203ENST00000536871 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.76
SMG6-203ENST00000536871 NXT2Q9NPJ8 142 aaKnown RBP10.27□□□□□ -0.76
SMG6-203ENST00000536871 CSN3P07498 182 aa10.27□□□□□ -0.77
SMG6-203ENST00000536871 KRTAP1-3Q8IUG1 177 aa10.27□□□□□ -0.77
SMG6-203ENST00000536871 DCANP1Q8TF63 244 aa10.27□□□□□ -0.77
SMG6-203ENST00000536871 WFDC12Q8WWY7 111 aa10.27□□□□□ -0.77
SMG6-203ENST00000536871 ZNF462Q96JM2 2506 aa10.26□□□□□ -0.77
SMG6-203ENST00000536871 CD5LO43866 347 aa10.26□□□□□ -0.77
SMG6-203ENST00000536871 SPANXN1Q5VSR9 72 aa10.26□□□□□ -0.77
SMG6-203ENST00000536871 SIGLEC8Q9NYZ4 499 aa10.26□□□□□ -0.77
SMG6-203ENST00000536871 LINC01546A6NGU7 62 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 TAX1BP3O14907 124 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 ASIPP42127 132 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 RNF185Q96GF1 192 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 C11orf21Q9P2W6 132 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 PRRC2AP48634 2157 aaKnown RBP10.25□□□□□ -0.77
SMG6-203ENST00000536871 PRSS47A8MTI9 375 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 HBDP02042 147 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 LEPP41159 167 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 SCGB2A2Q13296 93 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 MRAP2Q96G30 205 aa10.25□□□□□ -0.77
SMG6-203ENST00000536871 SPG11Q96JI7 2443 aa10.24□□□□□ -0.77
SMG6-203ENST00000536871 J3QKU1 62 aa10.24□□□□□ -0.77
SMG6-203ENST00000536871 DUSP14O95147 198 aaKnown RBP10.24□□□□□ -0.77
SMG6-203ENST00000536871 IFI27P40305 119 aaPredicted RBP10.24□□□□□ -0.77
SMG6-203ENST00000536871 ZNF747Q9BV97 191 aa10.24□□□□□ -0.77
SMG6-203ENST00000536871 MYO18BQ8IUG5 2567 aa10.24□□□□□ -0.77
SMG6-203ENST00000536871 UBR5O95071 2799 aaPredicted RBP10.24□□□□□ -0.77
SMG6-203ENST00000536871 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 OR4C46A6NHA9 309 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 KLLNB2CW77 178 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
SMG6-203ENST00000536871 PSMG4Q5JS54 123 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 MS4A6AQ9H2W1 248 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 GAGE12BA1L429 117 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 PPP1R17O96001 155 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 LINC01545Q5VT33 79 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 PMCHL2Q9BQD1 86 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 PEMTQ9UBM1 199 aa10.23□□□□□ -0.77
SMG6-203ENST00000536871 COL12A1Q99715 3063 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 MUC21A0A0G2JKD1 596 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 MUC21A0A140T8X8 626 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 K7EQG2 157 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 TNFRSF6BO95407 300 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 NPYP01303 97 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 SMIM17P0DL12 118 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
SMG6-203ENST00000536871 PRR31Q5SQ13 230 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 MUC21Q5SSG8 566 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 BVES-AS1Q5T3Y7 98 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 MSRB1Q9NZV6 116 aa10.22□□□□□ -0.77
SMG6-203ENST00000536871 IGHV4OR15-8A0A075B7B6 117 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 A0A087WW49 117 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 LOC389332A0A1B0GUA5 103 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 IGLL1P15814 213 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 RNASE4P34096 147 aaKnown RBP10.21□□□□□ -0.77
SMG6-203ENST00000536871 SYNJ2BPP57105 145 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 PRR9Q5T870 116 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 GTF2H5Q6ZYL4 71 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 C4orf3Q8WVX3 66 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 SCRT2Q9NQ03 307 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 PHLDA3Q9Y5J5 127 aa10.21□□□□□ -0.77
SMG6-203ENST00000536871 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 H3BVH4 76 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 K7EMI3 77 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 PLA2G2AP14555 144 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 C10orf99Q6UWK7 81 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 FAM159AQ6UWV7 190 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 FLNCQ14315 2725 aa10.21□□□□□ -0.78
SMG6-203ENST00000536871 LINC01619G3V211 115 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 G3V4G9 280 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 SEC11AP67812 179 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 MAJINQ3KP22 176 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 Q8N8P6 123 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 OR2K2Q8NGT1 345 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 DPF1Q92782 380 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 FOXC2Q99958 501 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 DPH3P1Q9H4G8 78 aa10.2□□□□□ -0.78
SMG6-203ENST00000536871 EVI2AP22794 236 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 LGALS9CQ6DKI2 356 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 FOXI2Q6ZQN5 318 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 CR1P17927 2039 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 A0A0J9YX75 114 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 M0R381 172 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 NXPH4O95158 308 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 FCER1GP30273 86 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 Q6ZVH6 145 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 FAM208BQ5VWN6 2430 aa10.19□□□□□ -0.78
SMG6-203ENST00000536871 C7orf71A4D174 169 aa10.18□□□□□ -0.78
SMG6-203ENST00000536871 F6UB75 175 aa10.18□□□□□ -0.78
SMG6-203ENST00000536871 SMKR1H3BMG3 65 aa10.18□□□□□ -0.78
SMG6-203ENST00000536871 NCR2O95944 276 aa10.18□□□□□ -0.78
SMG6-203ENST00000536871 MPV17L2Q567V2 206 aa10.18□□□□□ -0.78
SMG6-203ENST00000536871 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms