RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 IGHV1-69P01742 117 aa16.55■□□□□ 0.24
TRIM3-214ENST00000536344 MSMBP08118 114 aa16.55■□□□□ 0.24
TRIM3-214ENST00000536344 ZNF479Q96JC4 524 aa16.55■□□□□ 0.24
TRIM3-214ENST00000536344 GCN1Q92616 2671 aaKnown RBP16.55■□□□□ 0.24
TRIM3-214ENST00000536344 OOSP1A8MZH6 123 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 IGKV1-17P01599 117 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 EBI3Q14213 229 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 PVRIGQ6DKI7 326 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 ACANP16112 2415 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 ATP6V0E1O15342 81 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 ORMDL3Q8N138 153 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 J3QR89 54 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 FAM104BQ5XKR9 115 aa16.54■□□□□ 0.24
TRIM3-214ENST00000536344 M0R3E3 92 aa16.53■□□□□ 0.24
TRIM3-214ENST00000536344 CEND1Q8N111 149 aa16.53■□□□□ 0.24
TRIM3-214ENST00000536344 MAPKAPK5-AS1Q8N8E1 139 aa16.53■□□□□ 0.24
TRIM3-214ENST00000536344 TRGV9Q99603 122 aa16.53■□□□□ 0.24
TRIM3-214ENST00000536344 FLNAP21333 2647 aaKnown RBP16.52■□□□□ 0.24
TRIM3-214ENST00000536344 HECTD1Q9ULT8 2610 aa16.52■□□□□ 0.24
TRIM3-214ENST00000536344 RNF223E7ERA6 249 aa16.52■□□□□ 0.24
TRIM3-214ENST00000536344 GATD1Q8NB37 220 aa16.52■□□□□ 0.24
TRIM3-214ENST00000536344 MRAP2Q96G30 205 aa16.52■□□□□ 0.23
TRIM3-214ENST00000536344 OTORQ9NRC9 128 aa16.52■□□□□ 0.23
TRIM3-214ENST00000536344 ODF1Q14990 250 aa16.51■□□□□ 0.23
TRIM3-214ENST00000536344 TCTEX1D4Q5JR98 221 aa16.51■□□□□ 0.23
TRIM3-214ENST00000536344 ZNF493Q6ZR52 646 aa16.51■□□□□ 0.23
TRIM3-214ENST00000536344 PRO0461Q9UI25 63 aa16.51■□□□□ 0.23
TRIM3-214ENST00000536344 MYO9AB2RTY4 2548 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 GAGE13Q4V321 117 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 PIFOQ8TCI5 191 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 PSG8Q9UQ74 426 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 U3KQK5 164 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 CKS2P33552 79 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 ZC2HC1BQ5TFG8 222 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 NOTCH2Q04721 2471 aa16.5■□□□□ 0.23
TRIM3-214ENST00000536344 IGLV11-55A0A075B6I3 123 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 NPIPB5A8MRT5 1133 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 PRSS1P07477 247 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 FCER1GP30273 86 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 FHL3Q13643 280 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 FASNP49327 2511 aaKnown RBP16.49■□□□□ 0.23
TRIM3-214ENST00000536344 IL4P05112 153 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 C12orf74Q32Q52 190 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 TM2D2Q9BX73 214 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 HIGD1BQ9P298 99 aa16.49■□□□□ 0.23
TRIM3-214ENST00000536344 A0A1B0GWB2 263 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 H3BUX3 64 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 TGFAP01135 160 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 MT-ATP8P03928 68 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 SYT8Q8NBV8 401 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 ZNF48Q96MX3 618 aaPredicted RBP16.48■□□□□ 0.23
TRIM3-214ENST00000536344 SLC25A39Q9BZJ4 359 aaPredicted RBP16.48■□□□□ 0.23
TRIM3-214ENST00000536344 MSRB1Q9NZV6 116 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 HIGD1AQ9Y241 93 aa16.48■□□□□ 0.23
TRIM3-214ENST00000536344 B4DSR2 109 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 LEPP41159 167 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 GLMPQ8WWB7 406 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 NF1P21359 2839 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 F8W735 103 aaPredicted RBP16.47■□□□□ 0.23
TRIM3-214ENST00000536344 EVI2AP22794 236 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 SFTA2Q6UW10 78 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 TTC9CQ8N5M4 171 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 FOXC2Q99958 501 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 CDIP1Q9H305 208 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 Q6ZS46 218 aa16.47■□□□□ 0.23
TRIM3-214ENST00000536344 C5orf56Q8N8D9 126 aa16.46■□□□□ 0.23
TRIM3-214ENST00000536344 TMEM160Q9NX00 188 aa16.46■□□□□ 0.23
TRIM3-214ENST00000536344 GATA1P15976 413 aaPredicted RBP16.46■□□□□ 0.22
TRIM3-214ENST00000536344 C8orf86Q6ZUL3 223 aa16.46■□□□□ 0.22
TRIM3-214ENST00000536344 SRSF8Q9BRL6 282 aaKnown RBP16.46■□□□□ 0.22
TRIM3-214ENST00000536344 C21orf62Q9NYP8 219 aa16.46■□□□□ 0.22
TRIM3-214ENST00000536344 SPINK8P0C7L1 97 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 CT45A10P0DMU9 189 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 C15orf32Q32M92 178 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 MRPL16Q9NX20 251 aaKnown RBP16.45■□□□□ 0.22
TRIM3-214ENST00000536344 CUBNO60494 3623 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 SETD2Q9BYW2 2564 aaPredicted RBP16.45■□□□□ 0.22
TRIM3-214ENST00000536344 APOMO95445 188 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 IGKCP01834 107 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 TWIST1Q15672 202 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 ZMAT4Q9H898 229 aa16.45■□□□□ 0.22
TRIM3-214ENST00000536344 BLCAPP62952 87 aa16.44■□□□□ 0.22
TRIM3-214ENST00000536344 NFE4Q86UQ8 179 aa16.44■□□□□ 0.22
TRIM3-214ENST00000536344 ZNF491Q8N8L2 437 aa16.44■□□□□ 0.22
TRIM3-214ENST00000536344 RNF183Q96D59 192 aa16.44■□□□□ 0.22
TRIM3-214ENST00000536344 SS18L2Q9UHA2 77 aa16.44■□□□□ 0.22
TRIM3-214ENST00000536344 A0A1B0GW15 77 aa16.43■□□□□ 0.22
TRIM3-214ENST00000536344 MFAP4P55083 255 aa16.43■□□□□ 0.22
TRIM3-214ENST00000536344 SIGLEC15Q6ZMC9 328 aa16.43■□□□□ 0.22
TRIM3-214ENST00000536344 PTH2Q96A98 100 aa16.43■□□□□ 0.22
TRIM3-214ENST00000536344 RNF125Q96EQ8 232 aa16.43■□□□□ 0.22
TRIM3-214ENST00000536344 CR1P17927 2039 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 TRBV19A0A075B6N1 114 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 SMCPP49901 116 aaPredicted RBP16.42■□□□□ 0.22
TRIM3-214ENST00000536344 IGHV3OR16-13A0A075B7E8 117 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 IGHV3-74A0A0B4J1X5 117 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 XGP55808 180 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 FOXI1Q12951 378 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 TMEM75Q8N9X5 138 aa16.42■□□□□ 0.22
TRIM3-214ENST00000536344 UNC79Q9P2D8 2635 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms