RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 Q6ZS49 121 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 ZC2HC1AQ96GY0 325 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 DEFB112Q30KQ8 113 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 C8orf31Q8N9H6 132 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 PLXNA3P51805 1871 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 SIP14410 1827 aa9.99□□□□□ -0.81
SPG11-203ENST00000535302 LYL1P12980 280 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
SPG11-203ENST00000535302 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 ZNF503Q96F45 646 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 SIGLEC8Q9NYZ4 499 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 PKDREJQ9NTG1 2253 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 TEX48A0A1B0GUV7 120 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 NPYP01303 97 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
SPG11-203ENST00000535302 C18orf32Q8TCD1 76 aa9.98□□□□□ -0.81
SPG11-203ENST00000535302 GVINP1Q7Z2Y8 2422 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 RHODO00212 210 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 Q8N8P6 123 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 PLA2G2CQ5R387 149 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 H3BRN7 92 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 FAM104BQ5XKR9 115 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 ANKRD29Q8N6D5 301 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 TRAV4A0A0B4J268 109 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 PRSS46E5RG02 174 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 F8W735 103 aaPredicted RBP9.97□□□□□ -0.81
SPG11-203ENST00000535302 PROP1O75360 226 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 TIRAPP58753 221 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 RSPO1Q2MKA7 263 aaPredicted RBP9.97□□□□□ -0.81
SPG11-203ENST00000535302 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
SPG11-203ENST00000535302 LMO1P25800 156 aa9.96□□□□□ -0.81
SPG11-203ENST00000535302 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.81
SPG11-203ENST00000535302 C9orf118A6NHY6 69 aa9.96□□□□□ -0.81
SPG11-203ENST00000535302 YPEL3P61236 119 aaPredicted RBP9.96□□□□□ -0.81
SPG11-203ENST00000535302 Q9H8V8 135 aa9.96□□□□□ -0.81
SPG11-203ENST00000535302 GATA3P23771 443 aa9.96□□□□□ -0.82
SPG11-203ENST00000535302 CCL24O00175 119 aa9.96□□□□□ -0.82
SPG11-203ENST00000535302 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.82
SPG11-203ENST00000535302 IGHG2P01859 326 aa9.96□□□□□ -0.82
SPG11-203ENST00000535302 PDE6HQ13956 83 aa9.96□□□□□ -0.82
SPG11-203ENST00000535302 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
SPG11-203ENST00000535302 MRPL27Q9P0M9 148 aaKnown RBP9.96□□□□□ -0.82
SPG11-203ENST00000535302 RITA1Q96K30 269 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 C1orf43Q9BWL3 253 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 IGFL3Q6UXB1 125 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 KIAA1671Q9BY89 1806 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 RPL39LQ96EH5 51 aaKnown RBP9.95□□□□□ -0.82
SPG11-203ENST00000535302 C1orf147Q96MC9 270 aaPredicted RBP9.95□□□□□ -0.82
SPG11-203ENST00000535302 PRR25Q96S07 402 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 PCNX1Q96RV3 2341 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 NDUFA4O00483 81 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 IGLC2P0DOY2 106 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 IGLC3P0DOY3 106 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 IGHV4-38-2P0DP08 117 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 CTSZQ9UBR2 303 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 DENND4AQ7Z401 1863 aa9.95□□□□□ -0.82
SPG11-203ENST00000535302 GYPEP15421 78 aa9.94□□□□□ -0.82
SPG11-203ENST00000535302 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
SPG11-203ENST00000535302 RMI2Q96E14 147 aa9.94□□□□□ -0.82
SPG11-203ENST00000535302 Q6ZWC4 215 aa9.94□□□□□ -0.82
SPG11-203ENST00000535302 IGHV7-4-1A0A0J9YVY3 117 aa9.94□□□□□ -0.82
SPG11-203ENST00000535302 C9orf47Q6ZRZ4 202 aa9.94□□□□□ -0.82
SPG11-203ENST00000535302 TRAV13-2A0A0B4J235 113 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 CNOT1A5YKK6 2376 aaKnown RBP9.93□□□□□ -0.82
SPG11-203ENST00000535302 UBE2AP49459 152 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 PIFOQ8TCI5 191 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 TNCP24821 2201 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 IGLL1P15814 213 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 FNDC10F2Z333 226 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 J3QQQ9 107 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 CAMK2N2Q96S95 79 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 V9GYV3 84 aa9.93□□□□□ -0.82
SPG11-203ENST00000535302 A0A096LNI7 61 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 IGLV1-44P01699 117 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 HIST2H2BDQ6DRA6 164 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 DYNAPQ8N1N2 210 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 ZNF492Q9P255 531 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 PPDPFLQ8WWR9 84 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 ORMDL1Q9P0S3 153 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 MGAMO43451 1857 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 CCL25O15444 150 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 FXYD5Q96DB9 178 aa9.92□□□□□ -0.82
SPG11-203ENST00000535302 MRPL53Q96EL3 112 aaKnown RBP9.92□□□□□ -0.82
SPG11-203ENST00000535302 IGHV4-30-2A0A087WSY4 118 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 ACYP1P07311 99 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 A0A1W2PPM0 123 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 B5MCH6 92 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 TM2D2Q9BX73 214 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 K7EP13 123 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 HERVK_113P63121 156 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 RBAKDNA6NC62 111 aa9.91□□□□□ -0.82
SPG11-203ENST00000535302 IGHV2-5P01817 119 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms