RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 LY6EQ16553 131 aa12.32□□□□□ -0.44
MCF2L-232ENST00000535094 RNF5Q99942 180 aa12.32□□□□□ -0.44
MCF2L-232ENST00000535094 IGLL5B9A064 214 aa12.32□□□□□ -0.44
MCF2L-232ENST00000535094 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
MCF2L-232ENST00000535094 ATP6V0E1O15342 81 aa12.32□□□□□ -0.44
MCF2L-232ENST00000535094 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.31□□□□□ -0.44
MCF2L-232ENST00000535094 OR10J6PQ8NGY7 276 aa12.31□□□□□ -0.44
MCF2L-232ENST00000535094 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
MCF2L-232ENST00000535094 BEX4Q9NWD9 120 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-232ENST00000535094 DPF1Q92782 380 aa12.31□□□□□ -0.44
MCF2L-232ENST00000535094 RPL39LQ96EH5 51 aaKnown RBP12.3□□□□□ -0.44
MCF2L-232ENST00000535094 SMAD5-AS1Q9Y6J3 95 aa12.3□□□□□ -0.44
MCF2L-232ENST00000535094 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
MCF2L-232ENST00000535094 KLHL30-AS1Q8NEE0 82 aa12.3□□□□□ -0.44
MCF2L-232ENST00000535094 IGKV3D-20A0A0C4DH25 116 aa12.3□□□□□ -0.44
MCF2L-232ENST00000535094 HLA-DRB4P13762 266 aa12.3□□□□□ -0.44
MCF2L-232ENST00000535094 ZNF256Q9Y2P7 627 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-232ENST00000535094 HLA-DRB4X5D2U9 266 aa12.3□□□□□ -0.44
MCF2L-232ENST00000535094 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-232ENST00000535094 SLC25A16P16260 332 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 SMPXQ9UHP9 88 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 F6UB75 175 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 IGF1P05019 195 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 A0A1B0GV72 72 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 H7C1H1 209 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 IGLC6P0CF74 106 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 PRTN3P24158 256 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 C8orf86Q6ZUL3 223 aa12.29□□□□□ -0.44
MCF2L-232ENST00000535094 NDUFS8O00217 210 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 PF4V1P10720 104 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 EEF1AKMT3Q96AZ1 226 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 MRPS12O15235 138 aaKnown RBP12.28□□□□□ -0.44
MCF2L-232ENST00000535094 HOXB4P17483 251 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-232ENST00000535094 INSL3P51460 131 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 SLC50A1Q9BRV3 221 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 C11orf21Q9P2W6 132 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 TRBV6-1A0A0K0K1D8 114 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 SRSF8Q9BRL6 282 aaKnown RBP12.28□□□□□ -0.44
MCF2L-232ENST00000535094 PRADC1Q9BSG0 188 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 HHLA3Q9XRX5 114 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 U3KQK5 164 aa12.28□□□□□ -0.44
MCF2L-232ENST00000535094 FOXI2Q6ZQN5 318 aa12.27□□□□□ -0.44
MCF2L-232ENST00000535094 IGHV7-81A0A0B4J1V7 117 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 ASIPP42127 132 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 RELNP78509 3460 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 A0A087WWL8 130 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 TMEM238LA0A1B0GVL6 79 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 A6NJY4 79 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 TNFRSF13BO14836 293 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-232ENST00000535094 PLNP26678 52 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 C16orf54Q6UWD8 224 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 C2orf66Q6UXQ4 117 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 ZNF292O60281 2723 aa12.27□□□□□ -0.45
MCF2L-232ENST00000535094 A0A087WX48 190 aa12.26□□□□□ -0.45
MCF2L-232ENST00000535094 PTH2Q96A98 100 aa12.26□□□□□ -0.45
MCF2L-232ENST00000535094 BUB3O43684 328 aa12.26□□□□□ -0.45
MCF2L-232ENST00000535094 CKS1BP61024 79 aa12.26□□□□□ -0.45
MCF2L-232ENST00000535094 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
MCF2L-232ENST00000535094 F8VRH5 84 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 PRSS2P07478 247 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 HERVK_113P61574 105 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 SPAG8Q99932 426 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-232ENST00000535094 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 MYMXA0A1B0GTQ4 84 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 RAB9AP51151 201 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 SYT8Q8NBV8 401 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 SAA4P35542 130 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 BRD3OSQ6XYD6 125 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 RAX2Q96IS3 184 aa12.25□□□□□ -0.45
MCF2L-232ENST00000535094 SONP18583 2426 aaKnown RBP12.24□□□□□ -0.45
MCF2L-232ENST00000535094 F8W1H4 67 aa12.24□□□□□ -0.45
MCF2L-232ENST00000535094 GNRH2O43555 120 aa12.24□□□□□ -0.45
MCF2L-232ENST00000535094 ORMDL2Q53FV1 153 aa12.24□□□□□ -0.45
MCF2L-232ENST00000535094 C20orf78Q9BR46 151 aa12.24□□□□□ -0.45
MCF2L-232ENST00000535094 RRN3P1Q2M238 152 aa12.24□□□□□ -0.45
MCF2L-232ENST00000535094 PAX8Q06710 450 aa12.23□□□□□ -0.45
MCF2L-232ENST00000535094 SPENQ96T58 3664 aaKnown RBP12.23□□□□□ -0.45
MCF2L-232ENST00000535094 PRSS29PA6NIE9 313 aa12.23□□□□□ -0.45
MCF2L-232ENST00000535094 Q8NA96 180 aa12.23□□□□□ -0.45
MCF2L-232ENST00000535094 POLQO75417 2590 aa12.23□□□□□ -0.45
MCF2L-232ENST00000535094 F8W735 103 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-232ENST00000535094 LY6LH3BQJ8 138 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 ANXA2RQ3ZCQ2 193 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 LINC01559Q495D7 138 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 PSMG4Q5JS54 123 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 HIGD1BQ9P298 99 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 ZNF56Q15929 161 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 NPBQ8NG41 125 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 OR11H6Q8NGC7 330 aa12.22□□□□□ -0.45
MCF2L-232ENST00000535094 CD7P09564 240 aa12.21□□□□□ -0.45
MCF2L-232ENST00000535094 SPINK8P0C7L1 97 aa12.21□□□□□ -0.45
MCF2L-232ENST00000535094 ZFP36P26651 326 aaKnown RBP12.21□□□□□ -0.45
MCF2L-232ENST00000535094 FAM159AQ6UWV7 190 aa12.21□□□□□ -0.45
MCF2L-232ENST00000535094 KIR2DL4Q99706 377 aa12.21□□□□□ -0.45
MCF2L-232ENST00000535094 SPOCK3Q9BQ16 436 aa12.21□□□□□ -0.45
MCF2L-232ENST00000535094 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.46
MCF2L-232ENST00000535094 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.46
MCF2L-232ENST00000535094 SPANXB1Q9NS25 103 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms