RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 LENEPQ9Y5L5 61 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 A0A0G2JLM5 398 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 LGALS9BQ3B8N2 356 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 ANKRD39Q53RE8 183 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 LGALS9CQ6DKI2 356 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 C18orf15Q96N68 181 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 ZNF462Q96JM2 2506 aa11.6□□□□□ -0.55
CACNA1E-208ENST00000533229 USP24Q9UPU5 2620 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 IGLV2-18A0A075B6J9 118 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 LEPP41159 167 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 SPANXN1Q5VSR9 72 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 OR10J6PQ8NGY7 276 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 BBC3Q96PG8 261 aaPredicted RBP11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 DAZ1Q9NQZ3 744 aaKnown RBP11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 UFC1Q9Y3C8 167 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 OVOL1O14753 267 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 NUDT3O95989 172 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 GATA3P23771 443 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 DSCR9P59020 149 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 BVES-AS1Q5T3Y7 98 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 FAM19A4Q96LR4 140 aa11.59□□□□□ -0.55
CACNA1E-208ENST00000533229 TAX1BP3O14907 124 aa11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 COX8AP10176 69 aa11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 PSMB8P28062 276 aa11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 TCTAP57738 103 aa11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 NRACQ8N912 160 aa11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 OR2K2Q8NGT1 345 aa11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 NXT2Q9NPJ8 142 aaKnown RBP11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 PEF1Q9UBV8 284 aaKnown RBP11.58□□□□□ -0.56
CACNA1E-208ENST00000533229 CENPEQ02224 2701 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 SLC25A16P16260 332 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 LINC01356Q8N9X3 169 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 SMPXQ9UHP9 88 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 FCER1GP30273 86 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 SRSF1Q07955 248 aaKnown RBP eCLIP11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 C2orf91Q6ZV80 131 aa11.57□□□□□ -0.56
CACNA1E-208ENST00000533229 TGFAP01135 160 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 FGF6P10767 208 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 RNASE4P34096 147 aaKnown RBP11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 ANXA2RQ3ZCQ2 193 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 FAM208BQ5VWN6 2430 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 TRAV21A0A0B4J279 112 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 RBX1P62877 108 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 SMIM15Q7Z3B0 74 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 Q8N8P6 123 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 TMEM158Q8WZ71 300 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 LRRK2Q5S007 2527 aa11.56□□□□□ -0.56
CACNA1E-208ENST00000533229 A1L4Q6 167 aa11.55□□□□□ -0.56
CACNA1E-208ENST00000533229 M0R381 172 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 GNRH2O43555 120 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 VAMP3Q15836 100 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 DCANP1Q8TF63 244 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 ZNF580Q9UK33 172 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 EPG5Q9HCE0 2579 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 CBY3A6NI87 242 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 PRSS47A8MTI9 375 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 DPF1Q92782 380 aa11.54□□□□□ -0.56
CACNA1E-208ENST00000533229 K7EMT4 169 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 K7EP13 123 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 CD5LO43866 347 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 KRTAP10-9P60411 292 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 DEFB125Q8N687 156 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 WFDC12Q8WWY7 111 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 S100A4P26447 101 aaKnown RBP11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 PCP4P48539 62 aa11.53□□□□□ -0.56
CACNA1E-208ENST00000533229 RNF223E7ERA6 249 aa11.52□□□□□ -0.57
CACNA1E-208ENST00000533229 RNASE3P12724 160 aaKnown RBP11.52□□□□□ -0.57
CACNA1E-208ENST00000533229 ASIPP42127 132 aa11.52□□□□□ -0.57
CACNA1E-208ENST00000533229 ODF1Q14990 250 aa11.52□□□□□ -0.57
CACNA1E-208ENST00000533229 UBR5O95071 2799 aaPredicted RBP11.52□□□□□ -0.57
CACNA1E-208ENST00000533229 ANKRD17O75179 2603 aaKnown RBP11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 SMIM17P0DL12 118 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 C14orf178Q8N769 122 aaPredicted RBP11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 OR1N2Q8NGR9 330 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 MXRA5Q9NR99 2828 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 PRSS1P07477 247 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 COX6B1P14854 86 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 BOD1L2Q8IYS8 172 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 HHLA3Q9XRX5 114 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 PHLDA3Q9Y5J5 127 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 PTPN13Q12923 2485 aa11.51□□□□□ -0.57
CACNA1E-208ENST00000533229 LAGE3Q14657 143 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 ZMAT4Q9H898 229 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 TRBV7-9A0A0J9YWB2 115 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 KLLNB2CW77 178 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 J3QLI3 93 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 RASL10AQ92737 203 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
CACNA1E-208ENST00000533229 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
CACNA1E-208ENST00000533229 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
CACNA1E-208ENST00000533229 RPL39LQ96EH5 51 aaKnown RBP11.49□□□□□ -0.57
CACNA1E-208ENST00000533229 ZNF469Q96JG9 3925 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms