RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 NDUFB6O95139 128 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 HIST1H1EP10412 219 aaKnown RBP0.84□□□□□ -2.28
KNL1-211ENST00000533001 RCVRNP35243 200 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 SNRPD3P62318 126 aaKnown RBP0.84□□□□□ -2.28
KNL1-211ENST00000533001 NHLH2Q02577 135 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 Q8N377 158 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 SAMD12Q8N8I0 201 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 PLGRKTQ9HBL7 147 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 OR5AL1P0C617 328 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 OCMP0CE72 109 aaPredicted RBP0.84□□□□□ -2.28
KNL1-211ENST00000533001 RPS10P46783 165 aaKnown RBP0.84□□□□□ -2.28
KNL1-211ENST00000533001 TRAM1Q15629 374 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 TMEM128Q5BJH2 165 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 OR8I2Q8N0Y5 310 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 NPCDR1Q9BY65 106 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 KLK12Q9UKR0 248 aa0.84□□□□□ -2.28
KNL1-211ENST00000533001 DUXBA0A1W2PPF3 345 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 METTL15P1P0C7V9 234 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 STAG3L2P0CL84 134 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 STAG3L3P0CL85 134 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 ZNF138P52744 262 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 TMEM183BQ1AE95 376 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 Q6ZNX1 250 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 TMEM183AQ8IXX5 376 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 KRTAP3-1Q9BYR8 98 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 MRPS7Q9Y2R9 242 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 GOLT1BQ9Y3E0 138 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 ICOSQ9Y6W8 199 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 C9orf170A2RU37 121 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 DHFRP00374 187 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 ATP6V1E1P36543 226 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 CCR6P51684 374 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 HIST1H1AQ02539 215 aaPredicted RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 LCN15Q6UWW0 184 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 SNX29P2Q8IUI4 249 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 OR10AG1Q8NH19 301 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 NEK7Q8TDX7 302 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 RETNLBQ9BQ08 111 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 C20orf85Q9H1P6 137 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 H3BMQ9 156 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 UBE2NLQ5JXB2 153 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 C10orf126Q8N4M7 172 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 OR2G3Q8NGZ4 309 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 GTSF1Q8WW33 167 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 PGLYRP4Q96LB8 373 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 GGACTQ9BVM4 153 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 C6orf48Q9UBA6 75 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 TRBV10-1A0A0K0K1A3 114 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 SFT2D2O95562 160 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 IGHV3-30P01768 117 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 IGHV3-33P01772 117 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 IGHV3-30-3P0DP02 117 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 IGHV3-30-5P0DP03 117 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 RAB11AP62491 216 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 SSBP1Q04837 148 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 ARL6IP1Q15041 203 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 ZNF876PQ49A33 203 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 PHF5AQ7RTV0 110 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 NRACQ8N912 160 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 ZNF680Q8NEM1 530 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 ACY3Q96HD9 319 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 HYLS1Q96M11 299 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 GINS4Q9BRT9 223 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 CCDC59Q9P031 241 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 MGST1P10620 155 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 RPL7P18124 248 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 NUTF2P61970 127 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 RPL19P84098 196 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 H2BFWTQ7Z2G1 175 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 MRPL52Q86TS9 123 aaKnown RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 PLEKHB2Q96CS7 222 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 Q9HAA7 133 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 NPVFQ9HCQ7 196 aa0.83□□□□□ -2.28
KNL1-211ENST00000533001 LYRM2Q9NU23 88 aaPredicted RBP0.83□□□□□ -2.28
KNL1-211ENST00000533001 M0R2P5 195 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 DUSP14O95147 198 aaKnown RBP0.82□□□□□ -2.28
KNL1-211ENST00000533001 MYL12AP19105 171 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 NTF3P20783 257 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 PAFAH1B2P68402 229 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 MT1XP80297 61 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 OR5I1Q13606 314 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 FAM19A3Q7Z5A8 133 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 WDR61Q9GZS3 305 aaKnown RBP0.82□□□□□ -2.28
KNL1-211ENST00000533001 CXCL1P09341 107 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 NBEAP1P0C6P0 100 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 SULT1A3P0DMM9 295 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 SULT1A4P0DMN0 295 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 CD40LGP29965 261 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 CATR1Q13166 79 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 NRARPQ7Z6K4 114 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 ATP6V0E2Q8NHE4 81 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 SLC50A1Q9BRV3 221 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 SLC25A22Q9H936 323 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 CHTOPQ9Y3Y2 248 aaKnown RBP0.82□□□□□ -2.28
KNL1-211ENST00000533001 ACTL6BO94805 426 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 LTAP01374 205 aa0.82□□□□□ -2.28
KNL1-211ENST00000533001 TCRAP04437 139 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms