RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 GCGP01275 180 aa15.48■□□□□ 0.07
PTPRK-222ENST00000532751 UBE2G1P62253 170 aa15.48■□□□□ 0.07
PTPRK-222ENST00000532751 C15orf53Q8NAA6 179 aa15.48■□□□□ 0.07
PTPRK-222ENST00000532751 LINC00479Q96M42 142 aa15.48■□□□□ 0.07
PTPRK-222ENST00000532751 P0DMU3 169 aa15.47■□□□□ 0.07
PTPRK-222ENST00000532751 FAM231AP0DMU4 169 aa15.47■□□□□ 0.07
PTPRK-222ENST00000532751 FAM231CP0DMU5 169 aa15.47■□□□□ 0.07
PTPRK-222ENST00000532751 LGALS9BQ3B8N2 356 aa15.47■□□□□ 0.07
PTPRK-222ENST00000532751 SDF2L1Q9HCN8 221 aa15.47■□□□□ 0.07
PTPRK-222ENST00000532751 HYDINQ4G0P3 5121 aa15.46■□□□□ 0.07
PTPRK-222ENST00000532751 PFN1P07737 140 aaKnown RBP15.46■□□□□ 0.07
PTPRK-222ENST00000532751 Q86TA4 180 aa15.46■□□□□ 0.07
PTPRK-222ENST00000532751 FMC1Q96HJ9 113 aa15.46■□□□□ 0.07
PTPRK-222ENST00000532751 C18orf15Q96N68 181 aa15.46■□□□□ 0.07
PTPRK-222ENST00000532751 SPXQ9BT56 116 aa15.46■□□□□ 0.07
PTPRK-222ENST00000532751 AKR1C3P42330 323 aa15.45■□□□□ 0.06
PTPRK-222ENST00000532751 ZNF80P51504 273 aaPredicted RBP15.45■□□□□ 0.06
PTPRK-222ENST00000532751 OR5I1Q13606 314 aa15.45■□□□□ 0.06
PTPRK-222ENST00000532751 MDFICQ9P1T7 246 aa15.45■□□□□ 0.06
PTPRK-222ENST00000532751 TRAV1-1A0A0B4J248 108 aa15.44■□□□□ 0.06
PTPRK-222ENST00000532751 TYMSP04818 313 aa15.44■□□□□ 0.06
PTPRK-222ENST00000532751 MANBALQ9NQG1 85 aa15.44■□□□□ 0.06
PTPRK-222ENST00000532751 MRPL16Q9NX20 251 aaKnown RBP15.44■□□□□ 0.06
PTPRK-222ENST00000532751 ZFP30Q9Y2G7 519 aa15.44■□□□□ 0.06
PTPRK-222ENST00000532751 GNRH2O43555 120 aa15.43■□□□□ 0.06
PTPRK-222ENST00000532751 IGHV3-16A0A0C4DH30 117 aa15.42■□□□□ 0.06
PTPRK-222ENST00000532751 TRBV6-1A0A0K0K1D8 114 aa15.42■□□□□ 0.06
PTPRK-222ENST00000532751 UBE2DNLQ8IWF7 75 aa15.42■□□□□ 0.06
PTPRK-222ENST00000532751 FABP5P3A8MUU1 101 aa15.41■□□□□ 0.06
PTPRK-222ENST00000532751 S100A9P06702 114 aaKnown RBP15.41■□□□□ 0.06
PTPRK-222ENST00000532751 GNG13Q9P2W3 67 aa15.41■□□□□ 0.06
PTPRK-222ENST00000532751 NUDT3O95989 172 aa15.4■□□□□ 0.06
PTPRK-222ENST00000532751 HOXA5P20719 270 aa15.4■□□□□ 0.06
PTPRK-222ENST00000532751 CCL20P78556 96 aa15.4■□□□□ 0.06
PTPRK-222ENST00000532751 POM121L12Q8N7R1 296 aa15.4■□□□□ 0.06
PTPRK-222ENST00000532751 TXNDC17Q9BRA2 123 aa15.4■□□□□ 0.06
PTPRK-222ENST00000532751 MUC4Q99102 2169 aa15.4■□□□□ 0.06
PTPRK-222ENST00000532751 TRAV26-1A0A087WT03 109 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 SCO2A0A1W2PP80 73 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 M0R2P5 195 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 IFNA1P01562 189 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 RASL10AQ92737 203 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 C11orf21Q9P2W6 132 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 VPS13DQ5THJ4 4388 aa15.39■□□□□ 0.05
PTPRK-222ENST00000532751 LTAP01374 205 aa15.38■□□□□ 0.05
PTPRK-222ENST00000532751 COX8CQ7Z4L0 72 aa15.38■□□□□ 0.05
PTPRK-222ENST00000532751 A0A0J9YY99 117 aa15.37■□□□□ 0.05
PTPRK-222ENST00000532751 IGHV3-53P01767 116 aa15.37■□□□□ 0.05
PTPRK-222ENST00000532751 NKX2-5P52952 324 aaPredicted RBP15.37■□□□□ 0.05
PTPRK-222ENST00000532751 RNF212Q495C1 297 aa15.37■□□□□ 0.05
PTPRK-222ENST00000532751 ZC2HC1AQ96GY0 325 aa15.37■□□□□ 0.05
PTPRK-222ENST00000532751 H3BNG1 76 aa15.36■□□□□ 0.05
PTPRK-222ENST00000532751 ORM1P02763 201 aa15.35■□□□□ 0.05
PTPRK-222ENST00000532751 SLAQ13239 276 aa15.35■□□□□ 0.05
PTPRK-222ENST00000532751 FAM162BQ5T6X4 162 aa15.35■□□□□ 0.05
PTPRK-222ENST00000532751 ALKAL2Q6UX46 152 aa15.35■□□□□ 0.05
PTPRK-222ENST00000532751 S100A4P26447 101 aaKnown RBP15.34■□□□□ 0.05
PTPRK-222ENST00000532751 BLOC1S1P78537 153 aa15.34■□□□□ 0.05
PTPRK-222ENST00000532751 IGKV3D-20A0A0C4DH25 116 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 B4DEV8 164 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 SH2D1AO60880 128 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 CRIP1P50238 77 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 CCL18P55774 89 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 ZNF674Q2M3X9 581 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 BAGE2Q86Y30 109 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 C9orf85Q96MD7 179 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 PRO0255Q9UI72 69 aa15.33■□□□□ 0.04
PTPRK-222ENST00000532751 TRAV4A0A0B4J268 109 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 TRGV4A0A0C4DH28 118 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 TAGLN2P37802 199 aaKnown RBP15.32■□□□□ 0.04
PTPRK-222ENST00000532751 ASIPP42127 132 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 MEF2BQ02080 365 aaPredicted RBP15.32■□□□□ 0.04
PTPRK-222ENST00000532751 NHLRC2Q8NBF2 726 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 OR4C5Q8NGB2 326 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 C11orf52Q96A22 123 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 KMT2AQ03164 3969 aa15.32■□□□□ 0.04
PTPRK-222ENST00000532751 NACAE9PAV3 2078 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 C9JCJ5 164 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 PAX4O43316 350 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 PDE6DO43924 150 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 BCL2P10415 239 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 FAM3BP58499 235 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-222ENST00000532751 FHL2Q14192 279 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 ZNF876PQ49A33 203 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 ZNF479Q96JC4 524 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 BOLA1Q9Y3E2 137 aa15.31■□□□□ 0.04
PTPRK-222ENST00000532751 M0R036 132 aa15.3■□□□□ 0.04
PTPRK-222ENST00000532751 SFTA3P0C7M3 94 aa15.3■□□□□ 0.04
PTPRK-222ENST00000532751 RNASE3P12724 160 aaKnown RBP15.3■□□□□ 0.04
PTPRK-222ENST00000532751 RPL35P42766 123 aaKnown RBP15.3■□□□□ 0.04
PTPRK-222ENST00000532751 VSIG2Q96IQ7 327 aa15.3■□□□□ 0.04
PTPRK-222ENST00000532751 VAX2Q9UIW0 290 aa15.3■□□□□ 0.04
PTPRK-222ENST00000532751 HHLA3Q9XRX5 114 aa15.3■□□□□ 0.04
PTPRK-222ENST00000532751 KRBOX1C9JBD0 128 aa15.29■□□□□ 0.04
PTPRK-222ENST00000532751 LINC01559Q495D7 138 aa15.29■□□□□ 0.04
PTPRK-222ENST00000532751 PTH2Q96A98 100 aa15.29■□□□□ 0.04
PTPRK-222ENST00000532751 DNAH6Q9C0G6 4158 aa15.29■□□□□ 0.04
PTPRK-222ENST00000532751 CRYBA4P53673 196 aa15.28■□□□□ 0.04
PTPRK-222ENST00000532751 MLST8Q9BVC4 326 aa15.28■□□□□ 0.04
PTPRK-222ENST00000532751 ICOSQ9Y6W8 199 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms