RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 PEF1Q9UBV8 284 aaKnown RBP12.76□□□□□ -0.37
VPS26B-206ENST00000531741 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 B4DSR2 109 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 IGKCP01834 107 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 GATA3P23771 443 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 SRSF1Q07955 248 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS26B-206ENST00000531741 OR4C5Q8NGB2 326 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 ITPR1Q14643 2758 aa12.75□□□□□ -0.37
VPS26B-206ENST00000531741 TRAV26-2A0A0B4J265 109 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 A6NDN8 102 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 K7EMT4 169 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 ASIPP42127 132 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 SAMD13Q5VXD3 122 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 RHPN1-AS1Q9BWJ2 59 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 C7orf71A4D174 169 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 CBY3A6NI87 242 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 K7EMI3 77 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 DPM2O94777 84 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 HLA-DRB4P13762 266 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 NMUP48645 174 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 DSCR9P59020 149 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 MYOZ3Q8TDC0 251 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 HLA-DRB4X5D2U9 266 aa12.74□□□□□ -0.37
VPS26B-206ENST00000531741 Q6ZS46 218 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 FOXC2Q99958 501 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 C20orf78Q9BR46 151 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 SMIM2Q9BVW6 85 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 HIGD1BQ9P298 99 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 H3BRM9 83 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
VPS26B-206ENST00000531741 M0R381 172 aa12.72□□□□□ -0.37
VPS26B-206ENST00000531741 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
VPS26B-206ENST00000531741 SPOCK3Q9BQ16 436 aa12.72□□□□□ -0.37
VPS26B-206ENST00000531741 SVEP1Q4LDE5 3571 aa12.72□□□□□ -0.37
VPS26B-206ENST00000531741 S100A4P26447 101 aaKnown RBP12.71□□□□□ -0.37
VPS26B-206ENST00000531741 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
VPS26B-206ENST00000531741 NXPH4O95158 308 aa12.71□□□□□ -0.38
VPS26B-206ENST00000531741 SLC25A16P16260 332 aa12.71□□□□□ -0.38
VPS26B-206ENST00000531741 ORMDL2Q53FV1 153 aa12.71□□□□□ -0.38
VPS26B-206ENST00000531741 TM4SF20Q53R12 229 aa12.71□□□□□ -0.38
VPS26B-206ENST00000531741 AMMECR1LQ6DCA0 310 aa12.71□□□□□ -0.38
VPS26B-206ENST00000531741 PHLDA3Q9Y5J5 127 aa12.71□□□□□ -0.38
VPS26B-206ENST00000531741 A0A087WX48 190 aa12.7□□□□□ -0.38
VPS26B-206ENST00000531741 TRAV8-6A0A0B4J262 113 aa12.7□□□□□ -0.38
VPS26B-206ENST00000531741 AVPP01185 164 aa12.7□□□□□ -0.38
VPS26B-206ENST00000531741 SUMO2P61956 95 aaKnown RBP12.7□□□□□ -0.38
VPS26B-206ENST00000531741 POM121L12Q8N7R1 296 aa12.7□□□□□ -0.38
VPS26B-206ENST00000531741 RASL10AQ92737 203 aa12.7□□□□□ -0.38
VPS26B-206ENST00000531741 CBY1Q9Y3M2 126 aa12.7□□□□□ -0.38
VPS26B-206ENST00000531741 IGKV2D-26A0A0A0MRZ7 120 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 TRAV12-1A0A0B4J245 112 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 TMEM89A2RUT3 159 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 KLLNB2CW77 178 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 J3KRW8 73 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 RNASE4P34096 147 aaKnown RBP12.69□□□□□ -0.38
VPS26B-206ENST00000531741 C9orf118A6NHY6 69 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 PPP1R17O96001 155 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 PSMB8P28062 276 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 ERASQ7Z444 233 aa12.69□□□□□ -0.38
VPS26B-206ENST00000531741 F6UB75 175 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 RNASE3P12724 160 aaKnown RBP12.68□□□□□ -0.38
VPS26B-206ENST00000531741 ID1P41134 155 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 TCTAP57738 103 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 DEFB1P60022 68 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 LCNL1Q6ZST4 164 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.68□□□□□ -0.38
VPS26B-206ENST00000531741 PLNP26678 52 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 ZC2HC1BQ5TFG8 222 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 DCANP1Q8TF63 244 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 AP1S3Q96PC3 154 aa12.68□□□□□ -0.38
VPS26B-206ENST00000531741 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
VPS26B-206ENST00000531741 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
VPS26B-206ENST00000531741 C14orf178Q8N769 122 aaPredicted RBP12.66□□□□□ -0.38
VPS26B-206ENST00000531741 SPTAN1Q13813 2472 aaKnown RBP12.66□□□□□ -0.38
VPS26B-206ENST00000531741 ODF3Q96PU9 254 aa12.66□□□□□ -0.38
VPS26B-206ENST00000531741 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
VPS26B-206ENST00000531741 GNRH2O43555 120 aa12.65□□□□□ -0.38
VPS26B-206ENST00000531741 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
VPS26B-206ENST00000531741 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
VPS26B-206ENST00000531741 LINC01356Q8N9X3 169 aa12.65□□□□□ -0.38
VPS26B-206ENST00000531741 TMEM160Q9NX00 188 aa12.65□□□□□ -0.38
VPS26B-206ENST00000531741 PKD1L2Q7Z442 2459 aa12.65□□□□□ -0.38
VPS26B-206ENST00000531741 H7C1H1 209 aa12.65□□□□□ -0.39
VPS26B-206ENST00000531741 J3QLI3 93 aa12.65□□□□□ -0.39
VPS26B-206ENST00000531741 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 TRBV25-1A0A075B6N4 114 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 A0A087WW49 117 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 F8VRH5 84 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 CHAC1Q9BUX1 264 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
VPS26B-206ENST00000531741 RBX1P62877 108 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 UFSP1Q6NVU6 142 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 RPL39LQ96EH5 51 aaKnown RBP12.63□□□□□ -0.39
VPS26B-206ENST00000531741 A0A096LNT2 108 aa12.63□□□□□ -0.39
VPS26B-206ENST00000531741 IGHV4-59P01825 116 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms