RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 COX19Q49B96 90 aa10.65□□□□□ -0.71
TTC39A-216ENST00000530004 RASL11AQ6T310 242 aa10.65□□□□□ -0.71
TTC39A-216ENST00000530004 TMEM136Q6ZRR5 245 aa10.65□□□□□ -0.71
TTC39A-216ENST00000530004 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.71
TTC39A-216ENST00000530004 NAGKQ9UJ70 344 aa10.65□□□□□ -0.71
TTC39A-216ENST00000530004 HLA-DRB4X5D2U9 266 aa10.65□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BKO60814 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BJP06899 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BOP23527 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BBP33778 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 CAMPP49913 170 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BDP58876 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BCP62807 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST2H2BEQ16778 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 ODF3L2Q3SX64 289 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BHQ93079 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BNQ99877 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 HIST1H2BMQ99879 126 aa10.64□□□□□ -0.71
TTC39A-216ENST00000530004 ZMAT5Q9UDW3 170 aaKnown RBP10.64□□□□□ -0.71
TTC39A-216ENST00000530004 MGAM2Q2M2H8 2515 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 H3BMM0 161 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 MT-ND6P03923 174 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 ARMS2P0C7Q2 107 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 HBBP68871 147 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 LYZL1Q6UWQ5 148 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 AMTNQ6UX39 209 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 FER1L6-AS1Q8NA97 138 aa10.63□□□□□ -0.71
TTC39A-216ENST00000530004 M0R2Z0 102 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 HLA-DQA1P01909 254 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 IGLC6P0CF74 106 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 TSPOP30536 169 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 CDKN1BP46527 198 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 SPINK13Q1W4C9 94 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 PKD1L1Q8TDX9 2849 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 TRAV12-2A0A075B6T6 113 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 TRAV12-3A0A0B4J271 114 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 C7orf71A4D174 169 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 A8MTW9 85 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 S100A6P06703 90 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 CD7P09564 240 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 CTRLP40313 264 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 RIGQ13278 110 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 KPRPQ5T749 579 aaPredicted RBP10.62□□□□□ -0.71
TTC39A-216ENST00000530004 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
TTC39A-216ENST00000530004 ANXA2RQ3ZCQ2 193 aa10.61□□□□□ -0.71
TTC39A-216ENST00000530004 MUC21A0A0G2JKD1 596 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 MUC21A0A140T8X8 626 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 LOC105371267A0A1B0GV96 52 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 RBMY1BA6NDE4 496 aaKnown RBP10.6□□□□□ -0.71
TTC39A-216ENST00000530004 RBMY1EA6NEQ0 496 aaKnown RBP10.6□□□□□ -0.71
TTC39A-216ENST00000530004 RBMY1DP0C7P1 496 aaKnown RBP10.6□□□□□ -0.71
TTC39A-216ENST00000530004 FXYD7P58549 80 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 SSTP61278 116 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 GTSCR1Q86UQ5 136 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 SORL1Q92673 2214 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 APCSP02743 223 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 NDUFA6P56556 154 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 SSBP4Q9BWG4 385 aaPredicted RBP10.6□□□□□ -0.71
TTC39A-216ENST00000530004 C19orf73Q9NVV2 129 aa10.6□□□□□ -0.71
TTC39A-216ENST00000530004 A0A1B0GW15 77 aa10.59□□□□□ -0.71
TTC39A-216ENST00000530004 F2Z2F3 143 aa10.59□□□□□ -0.71
TTC39A-216ENST00000530004 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-216ENST00000530004 CMC4P56277 68 aaPredicted RBP10.59□□□□□ -0.71
TTC39A-216ENST00000530004 SNRPEP62304 92 aaKnown RBP10.59□□□□□ -0.71
TTC39A-216ENST00000530004 SLAQ13239 276 aa10.59□□□□□ -0.71
TTC39A-216ENST00000530004 S100A8P05109 93 aa10.58□□□□□ -0.72
TTC39A-216ENST00000530004 KIAA1644Q3SXP7 199 aa10.58□□□□□ -0.72
TTC39A-216ENST00000530004 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
TTC39A-216ENST00000530004 STHQ8IWL8 128 aa10.58□□□□□ -0.72
TTC39A-216ENST00000530004 Q8N1Y9 231 aa10.58□□□□□ -0.72
TTC39A-216ENST00000530004 AGRNO00468 2067 aa10.58□□□□□ -0.72
TTC39A-216ENST00000530004 C5orf52A6NGY3 159 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 H3BVH4 76 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 TWIST1Q15672 202 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 CRXO43186 299 aaPredicted RBP10.57□□□□□ -0.72
TTC39A-216ENST00000530004 GNRH2O43555 120 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 NTF3P20783 257 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
TTC39A-216ENST00000530004 ASIPP42127 132 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 GATD1Q8NB37 220 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 KCNS1Q96KK3 526 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
TTC39A-216ENST00000530004 TIMM8BQ9Y5J9 83 aaPredicted RBP10.57□□□□□ -0.72
TTC39A-216ENST00000530004 SNAI2O43623 268 aa10.56□□□□□ -0.72
TTC39A-216ENST00000530004 OR5AL1P0C617 328 aa10.56□□□□□ -0.72
TTC39A-216ENST00000530004 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
TTC39A-216ENST00000530004 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
TTC39A-216ENST00000530004 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
TTC39A-216ENST00000530004 IGHV1OR15-1A0A075B7D0 117 aa10.54□□□□□ -0.72
TTC39A-216ENST00000530004 RBMY1A1P0DJD3 496 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms