RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 K7ERU9 68 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 NDUFS8O00217 210 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 PPP1R17O96001 155 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 IGLV1-40P01703 118 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 TRBV12-3P01733 135 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 SUMO2P61956 95 aaKnown RBP6.33□□□□□ -1.4
CSTF3-208ENST00000528865 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 CEND1Q8N111 149 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 C10orf105Q8TEF2 133 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 CHAC1Q9BUX1 264 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 TMEM160Q9NX00 188 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 UFC1Q9Y3C8 167 aa6.33□□□□□ -1.4
CSTF3-208ENST00000528865 ANKRD11Q6UB99 2663 aaPredicted RBP6.33□□□□□ -1.4
CSTF3-208ENST00000528865 IGHV4OR15-8A0A075B7B6 117 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 A0A087WW49 117 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 IGHV4-61A0A0C4DH41 118 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 F8VRH5 84 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.32□□□□□ -1.4
CSTF3-208ENST00000528865 PLNP26678 52 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 ASIPP42127 132 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 FXYD2P54710 66 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 TCTAP57738 103 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 LINC00315P59091 139 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 CFHR3Q02985 330 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 ANXA2RQ3ZCQ2 193 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 SAMD13Q5VXD3 122 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 NEXN-AS1Q8NBZ9 246 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 SPOCK3Q9BQ16 436 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 PIMREGQ9BSJ6 248 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 LINC00527Q9UJ94 153 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 KIF25-AS1Q9Y6Z4 181 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 MUC6Q6W4X9 2439 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 MGAQ8IWI9 3026 aa6.32□□□□□ -1.4
CSTF3-208ENST00000528865 AKAP13Q12802 2813 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 TLN1Q9Y490 2541 aaKnown RBP6.31□□□□□ -1.4
CSTF3-208ENST00000528865 IGHV3OR16-10A0A075B7F0 116 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 LINC01549A6NIU2 74 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 KLLNB2CW77 178 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 E9PLD3 99 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 FABP2P12104 132 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 RNASE3P12724 160 aaKnown RBP6.31□□□□□ -1.4
CSTF3-208ENST00000528865 GCSHP23434 173 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 SAMD5Q5TGI4 173 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 RHPN1-AS1Q9BWJ2 59 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 TTTY13Q9BZ97 58 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 KLK15Q9H2R5 256 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 CHTOPQ9Y3Y2 248 aaKnown RBP6.31□□□□□ -1.4
CSTF3-208ENST00000528865 SPCS1Q9Y6A9 102 aa6.31□□□□□ -1.4
CSTF3-208ENST00000528865 MED13LQ71F56 2210 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 A0A1B0GWB2 263 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 G3V4G9 280 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 GNRH2O43555 120 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 IGHV4-38-2P0DP08 117 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 GNLYP22749 145 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
CSTF3-208ENST00000528865 RNASE4P34096 147 aaKnown RBP6.3□□□□□ -1.4
CSTF3-208ENST00000528865 LY6DQ14210 128 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 BRD3OSQ6XYD6 125 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 RAB37Q96AX2 223 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 PHLDA3Q9Y5J5 127 aa6.3□□□□□ -1.4
CSTF3-208ENST00000528865 MYMXA0A1B0GTQ4 84 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 TMEM89A2RUT3 159 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 IGLL5B9A064 214 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 H3BUX3 64 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 POLR2KP53803 58 aaKnown RBP6.29□□□□□ -1.4
CSTF3-208ENST00000528865 BLCAPP62952 87 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 C12orf74Q32Q52 190 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 C14orf178Q8N769 122 aaPredicted RBP6.29□□□□□ -1.4
CSTF3-208ENST00000528865 RNF152Q8N8N0 203 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
CSTF3-208ENST00000528865 ODF3Q96PU9 254 aa6.29□□□□□ -1.4
CSTF3-208ENST00000528865 SMG1Q96Q15 3661 aaKnown RBP6.29□□□□□ -1.4
CSTF3-208ENST00000528865 TRBV6-5A0A0K0K1A5 114 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 PRSS29PA6NIE9 313 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 IGHV3-11P01762 117 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 PF4V1P10720 104 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 ID1P41134 155 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 DEFB1P60022 68 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 LY6EQ16553 131 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 TM4SF20Q53R12 229 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 Q6ZS46 218 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 NAA38Q9BRA0 125 aaKnown RBP6.28□□□□□ -1.4
CSTF3-208ENST00000528865 VPS25Q9BRG1 176 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 DAZ1Q9NQZ3 744 aaKnown RBP6.28□□□□□ -1.4
CSTF3-208ENST00000528865 SPTBN2O15020 2390 aa6.28□□□□□ -1.4
CSTF3-208ENST00000528865 IGIPA6NJ69 53 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 OR11H12B2RN74 326 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 F6UB75 175 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 J3KRW8 73 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 VCYO14598 125 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 SPRY2O43597 315 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 SAP30O75446 220 aa6.27□□□□□ -1.41
CSTF3-208ENST00000528865 CRYGDP07320 174 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms