RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PIP4P2Q8N4L2 257 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 C14orf178Q8N769 122 aaPredicted RBP14.05□□□□□ -0.16
LTBP3-210ENST00000528516 CCL19Q99731 98 aa14.05□□□□□ -0.16
LTBP3-210ENST00000528516 H3BUX3 64 aa14.04□□□□□ -0.16
LTBP3-210ENST00000528516 ZNF292O60281 2723 aa14.04□□□□□ -0.16
LTBP3-210ENST00000528516 RNF183Q96D59 192 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 PGPEP1Q9NXJ5 209 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 MT-ATP8P03928 68 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 TMEM158Q8WZ71 300 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 E9PLD3 99 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 GNLYP22749 145 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 THAP8Q8NA92 274 aa14.03□□□□□ -0.16
LTBP3-210ENST00000528516 CEACAM4O75871 244 aa14.02□□□□□ -0.16
LTBP3-210ENST00000528516 ANXA2RQ3ZCQ2 193 aa14.02□□□□□ -0.16
LTBP3-210ENST00000528516 LINC00477Q96M19 166 aa14.02□□□□□ -0.16
LTBP3-210ENST00000528516 ATP6V0E1O15342 81 aa14.02□□□□□ -0.17
LTBP3-210ENST00000528516 HERVK_113P61574 105 aa14.02□□□□□ -0.17
LTBP3-210ENST00000528516 LHBP01229 141 aa14.02□□□□□ -0.17
LTBP3-210ENST00000528516 ID1P41134 155 aa14.02□□□□□ -0.17
LTBP3-210ENST00000528516 PAX8Q06710 450 aa14.02□□□□□ -0.17
LTBP3-210ENST00000528516 HOXA3O43365 443 aaPredicted RBP14.01□□□□□ -0.17
LTBP3-210ENST00000528516 DEFB1P60022 68 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 AGRNO00468 2067 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 B5MCH6 92 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 FCN3O75636 299 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 GATA1P15976 413 aaPredicted RBP14.01□□□□□ -0.17
LTBP3-210ENST00000528516 ASIPP42127 132 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 PIMREGQ9BSJ6 248 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 MSRB1Q9NZV6 116 aa14.01□□□□□ -0.17
LTBP3-210ENST00000528516 RRN3P1Q2M238 152 aa14□□□□□ -0.17
LTBP3-210ENST00000528516 MRPL35Q9NZE8 188 aaKnown RBP14□□□□□ -0.17
LTBP3-210ENST00000528516 TRBV19A0A075B6N1 114 aa14□□□□□ -0.17
LTBP3-210ENST00000528516 PTH2Q96A98 100 aa14□□□□□ -0.17
LTBP3-210ENST00000528516 KIR2DL4Q99706 377 aa14□□□□□ -0.17
LTBP3-210ENST00000528516 HIGD1BQ9P298 99 aa14□□□□□ -0.17
LTBP3-210ENST00000528516 A0A087WWL8 130 aa13.99□□□□□ -0.17
LTBP3-210ENST00000528516 ZNF562Q6V9R5 426 aa13.99□□□□□ -0.17
LTBP3-210ENST00000528516 IL17RELQ6ZVW7 336 aa13.99□□□□□ -0.17
LTBP3-210ENST00000528516 FOXI1Q12951 378 aa13.99□□□□□ -0.17
LTBP3-210ENST00000528516 ODF1Q14990 250 aa13.99□□□□□ -0.17
LTBP3-210ENST00000528516 TEX29Q8N6K0 151 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 TRAV12-3A0A0B4J271 114 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 ATP5LO75964 103 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 TEX36Q5VZQ5 186 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 ITLN2Q8WWU7 325 aaPredicted RBP13.98□□□□□ -0.17
LTBP3-210ENST00000528516 TRAV41A0A0B4J266 112 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 IGKV1-17P01599 117 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 PRTN3P24158 256 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 PSMG4Q5JS54 123 aa13.98□□□□□ -0.17
LTBP3-210ENST00000528516 DLX4Q92988 240 aaPredicted RBP13.98□□□□□ -0.17
LTBP3-210ENST00000528516 PRRC2AP48634 2157 aaKnown RBP13.98□□□□□ -0.17
LTBP3-210ENST00000528516 F6UB75 175 aa13.97□□□□□ -0.17
LTBP3-210ENST00000528516 OVOL3O00110 214 aa13.97□□□□□ -0.17
LTBP3-210ENST00000528516 GATA3P23771 443 aa13.97□□□□□ -0.17
LTBP3-210ENST00000528516 SHISA9B4DS77 424 aa13.97□□□□□ -0.17
LTBP3-210ENST00000528516 FSTL3O95633 263 aa13.97□□□□□ -0.17
LTBP3-210ENST00000528516 ZNF491Q8N8L2 437 aa13.97□□□□□ -0.17
LTBP3-210ENST00000528516 ZFAND6Q6FIF0 208 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 SIGLEC15Q6ZMC9 328 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 MAPKAPK5-AS1Q8N8E1 139 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 PRSS29PA6NIE9 313 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 IGLV2-11P01706 119 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 CGB3P0DN86 165 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 CGB7P0DN87 165 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 C1QTNF4Q9BXJ3 329 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 NXT2Q9NPJ8 142 aaKnown RBP13.96□□□□□ -0.17
LTBP3-210ENST00000528516 TNFRSF6BO95407 300 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 CRIP1P50238 77 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 CR1LQ2VPA4 569 aa13.96□□□□□ -0.17
LTBP3-210ENST00000528516 LINC01549A6NIU2 74 aa13.96□□□□□ -0.18
LTBP3-210ENST00000528516 TM2D2Q9BX73 214 aa13.96□□□□□ -0.18
LTBP3-210ENST00000528516 NPC2P61916 151 aa13.95□□□□□ -0.18
LTBP3-210ENST00000528516 IGFL3Q6UXB1 125 aa13.95□□□□□ -0.18
LTBP3-210ENST00000528516 PCSK5Q92824 1860 aa13.95□□□□□ -0.18
LTBP3-210ENST00000528516 A6NJY4 79 aa13.94□□□□□ -0.18
LTBP3-210ENST00000528516 EFNA4P52798 201 aa13.94□□□□□ -0.18
LTBP3-210ENST00000528516 Q6ZUT4 128 aa13.94□□□□□ -0.18
LTBP3-210ENST00000528516 PHLDA1Q8WV24 401 aaPredicted RBP13.94□□□□□ -0.18
LTBP3-210ENST00000528516 LAMA5O15230 3695 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 WI2-2373I1.2A0A1W2PRP0 233 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 KNCNA6PVL3 124 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 LGALS3P17931 250 aaKnown RBP13.93□□□□□ -0.18
LTBP3-210ENST00000528516 AKAP13Q12802 2813 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 XGP55808 180 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 SNRPD3P62318 126 aaKnown RBP13.93□□□□□ -0.18
LTBP3-210ENST00000528516 K7ENP7 123 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 PRR25Q96S07 402 aa13.93□□□□□ -0.18
LTBP3-210ENST00000528516 NPFFO15130 113 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 GAS8-AS1O95177 125 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 TTC32Q5I0X7 151 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 LYRM7Q5U5X0 104 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 ZNF493Q6ZR52 646 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 PTPRBP23467 1997 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 HHLA3Q9XRX5 114 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 GAGE5Q13069 117 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 GAGE6Q13070 117 aa13.92□□□□□ -0.18
LTBP3-210ENST00000528516 FLNBO75369 2602 aaKnown RBP13.91□□□□□ -0.18
LTBP3-210ENST00000528516 EGR2P11161 476 aaPredicted RBP13.91□□□□□ -0.18
LTBP3-210ENST00000528516 CFAP161Q6P656 301 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms