RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DEFA4P12838 97 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 GP1BBP13224 206 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 PLNP26678 52 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 CDAP32320 146 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 PCBD1P61457 104 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 FKBP1AP62942 108 aaKnown RBP2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 RIGQ13278 110 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 MYO7BQ6PIF6 2116 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 C2orf82Q6UX34 121 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 DAZ4Q86SG3 579 aaKnown RBP2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 Q8N8P6 123 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 FMC1Q96HJ9 113 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 FOXC2Q99958 501 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 NABP2Q9BQ15 211 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 PAXXQ9BUH6 204 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 TTTY13Q9BZ97 58 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 CCL28Q9NRJ3 127 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 DEPPQ9NTK1 212 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 COL4A5P29400 1685 aa2.79□□□□□ -1.96
CLNS1A-209ENST00000527299 TRBV6-6A0A0A6YYG2 114 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 TRBV7-1A0A0A6YYK4 115 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 TRAV41A0A0B4J266 112 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 TRBV30A0A0K0K1B3 111 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 A0A1B0GUT8 65 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 C17orf100A8MU93 164 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 PRSS46E5RG02 174 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 BCE1O60756 84 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 NGFP01138 241 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 VPREB1P12018 145 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 DUTP33316 252 aaKnown RBP2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 IFI27P40305 119 aaPredicted RBP2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 MAGEA5P43359 124 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 SPINT3P49223 89 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 CRIP2P52943 208 aaPredicted RBP2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 FKBP1BP68106 108 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 MIC13Q5XKP0 118 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 C9orf139Q6ZV77 190 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 LINC00305Q7Z4B0 112 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 DAND5Q8N907 189 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 SSMEM1Q8WWF3 244 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 ZNF799Q96GE5 643 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 PGLYRP4Q96LB8 373 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 C17orf77Q96MU5 243 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 TMEM243Q9BU79 118 aa2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 LSM4Q9Y4Z0 139 aaKnown RBP2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 TIMM8BQ9Y5J9 83 aaPredicted RBP2.78□□□□□ -1.96
CLNS1A-209ENST00000527299 TRAV12-1A0A0B4J245 112 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 IGHV1-58A0A0C4DH39 117 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 TMEM202A6NGA9 273 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 H3BTX0 84 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 M0R135 149 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 EFNA2O43921 213 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 IGHV3-33P01772 117 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 CFC1BP0CG36 223 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 CFC1P0CG37 223 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 ZNF22P17026 224 aaPredicted RBP2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 UBE2E1P51965 193 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 ZNF137PP52743 207 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 FGF12P61328 243 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 ORMDL2Q53FV1 153 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 Q6JHZ5 121 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 ORMDL3Q8N138 153 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 CD177Q8N6Q3 437 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 UBE2E2Q96LR5 201 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 S1PR3Q99500 378 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 TAC3Q9UHF0 121 aa2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 TNRC6BQ9UPQ9 1833 aaKnown RBP2.77□□□□□ -1.97
CLNS1A-209ENST00000527299 NOTCH2Q04721 2471 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 TRBV6-1A0A0K0K1D8 114 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 CXorf51AA0A1B0GTR3 108 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 USP17L23D6RBM5 183 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 H7C423 109 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 PRSS1P07477 247 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 CD24P25063 80 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 SAA4P35542 130 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 FOXL2NBQ6ZUU3 175 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 MIR17HGQ75NE6 70 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 C11orf45Q8TAV5 145 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 SMCR5Q8TEV8 140 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 ITLN1Q8WWA0 313 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 VSIG2Q96IQ7 327 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 TM2D3Q9BRN9 247 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 HES7Q9BYE0 225 aa2.76□□□□□ -1.97
CLNS1A-209ENST00000527299 TRAV40A0A0B4J280 105 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 IGKV1-6A0A0C4DH72 117 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 IQCF6A8MYZ5 107 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 C4orf51C9J302 202 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 F8VRH5 84 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 H7BZZ5 65 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 CCL21O00585 134 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 NDUFC1O43677 76 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 IGHV3-30P01768 117 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 IGHV3-30-5P0DP03 117 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 COX6B1P14854 86 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 APOC4P55056 127 aa2.75□□□□□ -1.97
CLNS1A-209ENST00000527299 SNRPD3P62318 126 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms