RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 FAM231CP0DMU5 169 aa10.6□□□□□ -0.71
HIF3A-210ENST00000526506 LGALS9BQ3B8N2 356 aa10.6□□□□□ -0.71
HIF3A-210ENST00000526506 SMUG1Q53HV7 270 aa10.6□□□□□ -0.71
HIF3A-210ENST00000526506 C9orf62Q8N4C0 152 aa10.6□□□□□ -0.71
HIF3A-210ENST00000526506 C15orf53Q8NAA6 179 aa10.6□□□□□ -0.71
HIF3A-210ENST00000526506 C18orf15Q96N68 181 aa10.6□□□□□ -0.71
HIF3A-210ENST00000526506 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
HIF3A-210ENST00000526506 ZNF80P51504 273 aaPredicted RBP10.59□□□□□ -0.71
HIF3A-210ENST00000526506 Q86TA4 180 aa10.59□□□□□ -0.71
HIF3A-210ENST00000526506 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
HIF3A-210ENST00000526506 SDF2L1Q9HCN8 221 aa10.59□□□□□ -0.71
HIF3A-210ENST00000526506 MDFICQ9P1T7 246 aa10.59□□□□□ -0.71
HIF3A-210ENST00000526506 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
HIF3A-210ENST00000526506 SULT1A2P50226 295 aa10.58□□□□□ -0.72
HIF3A-210ENST00000526506 UBE2G1P62253 170 aa10.58□□□□□ -0.72
HIF3A-210ENST00000526506 OR5I1Q13606 314 aa10.58□□□□□ -0.72
HIF3A-210ENST00000526506 FMC1Q96HJ9 113 aa10.58□□□□□ -0.72
HIF3A-210ENST00000526506 MRPL16Q9NX20 251 aaKnown RBP10.58□□□□□ -0.72
HIF3A-210ENST00000526506 TEX46H3BTG2 121 aa10.57□□□□□ -0.72
HIF3A-210ENST00000526506 GNRH2O43555 120 aa10.57□□□□□ -0.72
HIF3A-210ENST00000526506 HOXA5P20719 270 aa10.57□□□□□ -0.72
HIF3A-210ENST00000526506 AKR1C3P42330 323 aa10.57□□□□□ -0.72
HIF3A-210ENST00000526506 SPXQ9BT56 116 aa10.57□□□□□ -0.72
HIF3A-210ENST00000526506 IGHV3-16A0A0C4DH30 117 aa10.56□□□□□ -0.72
HIF3A-210ENST00000526506 TYMSP04818 313 aa10.56□□□□□ -0.72
HIF3A-210ENST00000526506 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
HIF3A-210ENST00000526506 MANBALQ9NQG1 85 aa10.56□□□□□ -0.72
HIF3A-210ENST00000526506 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
HIF3A-210ENST00000526506 ZFP30Q9Y2G7 519 aa10.56□□□□□ -0.72
HIF3A-210ENST00000526506 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
HIF3A-210ENST00000526506 TRAV26-1A0A087WT03 109 aa10.55□□□□□ -0.72
HIF3A-210ENST00000526506 TRBV6-1A0A0K0K1D8 114 aa10.55□□□□□ -0.72
HIF3A-210ENST00000526506 NUDT3O95989 172 aa10.55□□□□□ -0.72
HIF3A-210ENST00000526506 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
HIF3A-210ENST00000526506 GNG13Q9P2W3 67 aa10.55□□□□□ -0.72
HIF3A-210ENST00000526506 FABP5P3A8MUU1 101 aa10.54□□□□□ -0.72
HIF3A-210ENST00000526506 S100A9P06702 114 aaKnown RBP10.54□□□□□ -0.72
HIF3A-210ENST00000526506 CCL20P78556 96 aa10.54□□□□□ -0.72
HIF3A-210ENST00000526506 COX8CQ7Z4L0 72 aa10.54□□□□□ -0.72
HIF3A-210ENST00000526506 RASL10AQ92737 203 aa10.54□□□□□ -0.72
HIF3A-210ENST00000526506 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
HIF3A-210ENST00000526506 HYDINQ4G0P3 5121 aa10.54□□□□□ -0.72
HIF3A-210ENST00000526506 A0A0J9YY99 117 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 H3BNG1 76 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 M0R2P5 195 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 LTAP01374 205 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 IGHV3-53P01767 116 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 RNF212Q495C1 297 aa10.53□□□□□ -0.72
HIF3A-210ENST00000526506 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
HIF3A-210ENST00000526506 IFNA1P01562 189 aa10.51□□□□□ -0.73
HIF3A-210ENST00000526506 NKX2-5P52952 324 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-210ENST00000526506 FAM162BQ5T6X4 162 aa10.51□□□□□ -0.73
HIF3A-210ENST00000526506 IGKV3D-20A0A0C4DH25 116 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 SH2D1AO60880 128 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 ORM1P02763 201 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 CRIP1P50238 77 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
HIF3A-210ENST00000526506 SLAQ13239 276 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 ALKAL2Q6UX46 152 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 C11orf52Q96A22 123 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
HIF3A-210ENST00000526506 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 TRGV4A0A0C4DH28 118 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 B4DEV8 164 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 SFTA3P0C7M3 94 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 RNASE3P12724 160 aaKnown RBP10.49□□□□□ -0.73
HIF3A-210ENST00000526506 ASIPP42127 132 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 CCL18P55774 89 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
HIF3A-210ENST00000526506 FHL2Q14192 279 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 ZNF674Q2M3X9 581 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 ZNF876PQ49A33 203 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 NHLRC2Q8NBF2 726 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 MUC4Q99102 2169 aa10.49□□□□□ -0.73
HIF3A-210ENST00000526506 C9JCJ5 164 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 M0R036 132 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 PAX4O43316 350 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 BCL2P10415 239 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
HIF3A-210ENST00000526506 RPL35P42766 123 aaKnown RBP10.48□□□□□ -0.73
HIF3A-210ENST00000526506 BAGE2Q86Y30 109 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 BOLA1Q9Y3E2 137 aa10.48□□□□□ -0.73
HIF3A-210ENST00000526506 KRBOX1C9JBD0 128 aa10.47□□□□□ -0.73
HIF3A-210ENST00000526506 PDE6DO43924 150 aa10.47□□□□□ -0.73
HIF3A-210ENST00000526506 TAGLN2P37802 199 aaKnown RBP10.47□□□□□ -0.73
HIF3A-210ENST00000526506 CRYBA4P53673 196 aa10.47□□□□□ -0.73
HIF3A-210ENST00000526506 BLOC1S1P78537 153 aa10.47□□□□□ -0.73
HIF3A-210ENST00000526506 PTH2Q96A98 100 aa10.47□□□□□ -0.73
HIF3A-210ENST00000526506 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
HIF3A-210ENST00000526506 A0A096LPF7 62 aa10.46□□□□□ -0.73
HIF3A-210ENST00000526506 LINC01559Q495D7 138 aa10.46□□□□□ -0.73
HIF3A-210ENST00000526506 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
HIF3A-210ENST00000526506 IL36BQ9NZH7 164 aa10.46□□□□□ -0.73
HIF3A-210ENST00000526506 VAX2Q9UIW0 290 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms