RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 ANKRD39Q53RE8 183 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 TRBV25-1A0A075B6N4 114 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 IGFL4Q6B9Z1 124 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 SPACA3Q8IXA5 215 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 SEC61GP60059 68 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 C5orf64Q2M2E5 130 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 TDRG1Q3Y452 100 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 IGHV4-28A0A0C4DH34 117 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 TFF1P04155 84 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 ZC2HC1AQ96GY0 325 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 COX6A1P12074 109 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 WBP1Q96G27 269 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 MAST4O15021 2626 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 TRAV23DV6A0A075B6W5 121 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 LYPD6Q86Y78 171 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 PSCAO43653 123 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 FXYD2P54710 66 aa6.22□□□□□ -1.41
LRRK1-205ENST00000526457 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 COX7B2Q8TF08 81 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 SHANK2-AS3Q9BTD1 123 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 FAM231DQ6ZW35 169 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 UBE2DNLQ8IWF7 75 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 COL5A1P20908 1838 aaPredicted RBP6.21□□□□□ -1.41
LRRK1-205ENST00000526457 TRBV7-1A0A0A6YYK4 115 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 DKK1O94907 266 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 CRYGSP22914 178 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 MSRB2Q9Y3D2 182 aa6.21□□□□□ -1.41
LRRK1-205ENST00000526457 TRBV6-6A0A0A6YYG2 114 aa6.21□□□□□ -1.42
LRRK1-205ENST00000526457 VSIG2Q96IQ7 327 aa6.21□□□□□ -1.42
LRRK1-205ENST00000526457 F5H768 121 aa6.21□□□□□ -1.42
LRRK1-205ENST00000526457 BSPH1Q075Z2 132 aa6.21□□□□□ -1.42
LRRK1-205ENST00000526457 ZCCHC24Q8N2G6 241 aaKnown RBP6.21□□□□□ -1.42
LRRK1-205ENST00000526457 BUB3O43684 328 aa6.21□□□□□ -1.42
LRRK1-205ENST00000526457 NREPQ16612 68 aa6.21□□□□□ -1.42
LRRK1-205ENST00000526457 RPL35AP18077 110 aaKnown RBP6.2□□□□□ -1.42
LRRK1-205ENST00000526457 ZNF747Q9BV97 191 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 NDUFA7O95182 113 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 IGLV3-19P01714 112 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 UBE2E1P51965 193 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 TFF2Q03403 129 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 PRR30Q53SZ7 412 aaPredicted RBP6.2□□□□□ -1.42
LRRK1-205ENST00000526457 LINC00643Q86TS7 51 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 ZNF837Q96EG3 531 aaPredicted RBP6.2□□□□□ -1.42
LRRK1-205ENST00000526457 CENPVL3A0A0U1RRI6 287 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 C11orf44Q8N8P7 122 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 K7EMI3 77 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 COX6B1P14854 86 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 SLC25A29Q8N8R3 303 aa6.2□□□□□ -1.42
LRRK1-205ENST00000526457 PCOLCEQ15113 449 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 HIGD1BQ9P298 99 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
LRRK1-205ENST00000526457 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 RNASE13Q5GAN3 156 aaKnown RBP6.19□□□□□ -1.42
LRRK1-205ENST00000526457 FOXF2Q12947 444 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 UPK3BQ9BT76 320 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 Q9H8V8 135 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 M0QXV9 152 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 LTBRP36941 435 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 SLC22A18ASQ8N1D0 253 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 MDS2Q8NDY4 140 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 ATRQ13535 2644 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 H3BQ85 93 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 IGHV4-4A0A075B6R2 117 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 TRBV12-3P01733 135 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 TMEM61Q8N0U2 210 aa6.19□□□□□ -1.42
LRRK1-205ENST00000526457 CMC4P56277 68 aaPredicted RBP6.19□□□□□ -1.42
LRRK1-205ENST00000526457 DYNAPQ8N1N2 210 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 PYGO2Q9BRQ0 406 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 TRAV4A0A0B4J268 109 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 IGKV1-12A0A0C4DH73 117 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 IGKV1D-12P01611 117 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 IGLV3-12A0A075B6K2 115 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 H0YGX0 51 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 H3BT86 120 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 ZNF883P0CG24 379 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 RHOHQ15669 191 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 A6NED7 52 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 LGALS9O00182 355 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 LINC00473A8K010 186 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 C20orf78Q9BR46 151 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 IGKV1-27A0A075B6S5 117 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 C17orf100A8MU93 164 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 IGLC6P0CF74 106 aa6.18□□□□□ -1.42
LRRK1-205ENST00000526457 K7ERS5 55 aa6.17□□□□□ -1.42
LRRK1-205ENST00000526457 ASPHD1Q5U4P2 390 aa6.17□□□□□ -1.42
LRRK1-205ENST00000526457 H0YJW9 148 aa6.17□□□□□ -1.42
LRRK1-205ENST00000526457 FOXE3Q13461 319 aa6.17□□□□□ -1.42
LRRK1-205ENST00000526457 NEU4Q8WWR8 484 aaPredicted RBP6.17□□□□□ -1.42
LRRK1-205ENST00000526457 CHCHD2Q9Y6H1 151 aaPredicted RBP6.17□□□□□ -1.42
LRRK1-205ENST00000526457 Q6ZRM9 215 aa6.17□□□□□ -1.42
LRRK1-205ENST00000526457 TMEM219Q86XT9 240 aa6.17□□□□□ -1.42
LRRK1-205ENST00000526457 WISP1O95388 367 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms