RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 GATA1P15976 413 aaPredicted RBP16.01■□□□□ 0.15
USP47-205ENST00000525257 FAM30AQ9NZY2 134 aa16.01■□□□□ 0.15
USP47-205ENST00000525257 TMED6Q8WW62 240 aa16■□□□□ 0.15
USP47-205ENST00000525257 TRAV8-6A0A0B4J262 113 aa15.99■□□□□ 0.15
USP47-205ENST00000525257 F6UZH7 168 aa15.99■□□□□ 0.15
USP47-205ENST00000525257 EIF3GO75821 320 aaKnown RBP eCLIP15.99■□□□□ 0.15
USP47-205ENST00000525257 TYMSP04818 313 aa15.99■□□□□ 0.15
USP47-205ENST00000525257 KHDC3LQ587J8 217 aa15.99■□□□□ 0.15
USP47-205ENST00000525257 OR10J3Q5JRS4 329 aa15.99■□□□□ 0.15
USP47-205ENST00000525257 FFAR4Q5NUL3 377 aa15.99■□□□□ 0.15
USP47-205ENST00000525257 TRAV21A0A0B4J279 112 aa15.98■□□□□ 0.15
USP47-205ENST00000525257 H0YIZ8 118 aa15.98■□□□□ 0.15
USP47-205ENST00000525257 IGHV3-30P01768 117 aa15.98■□□□□ 0.15
USP47-205ENST00000525257 IGHV3-33P01772 117 aa15.98■□□□□ 0.15
USP47-205ENST00000525257 IGHV3-30-3P0DP02 117 aa15.98■□□□□ 0.15
USP47-205ENST00000525257 IGHV3-30-5P0DP03 117 aa15.98■□□□□ 0.15
USP47-205ENST00000525257 FBLL1A6NHQ2 334 aaKnown RBP15.97■□□□□ 0.15
USP47-205ENST00000525257 CMTM2Q8TAZ6 248 aa15.97■□□□□ 0.15
USP47-205ENST00000525257 SDF2L1Q9HCN8 221 aa15.97■□□□□ 0.15
USP47-205ENST00000525257 OTORQ9NRC9 128 aa15.97■□□□□ 0.15
USP47-205ENST00000525257 PGPA6NDG6 321 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 PFN1P07737 140 aaKnown RBP15.96■□□□□ 0.15
USP47-205ENST00000525257 TAS2R45P59539 299 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 GOLT1AQ6ZVE7 132 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 SLC25A29Q8N8R3 303 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 ATP5SQ99766 215 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 CCDC32Q9BV29 185 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 NMES1Q9C002 83 aa15.96■□□□□ 0.15
USP47-205ENST00000525257 TVP23CQ96ET8 276 aa15.95■□□□□ 0.14
USP47-205ENST00000525257 TREM1Q9NP99 234 aa15.95■□□□□ 0.14
USP47-205ENST00000525257 TRAV8-1A0A0A6YYK1 113 aa15.94■□□□□ 0.14
USP47-205ENST00000525257 MZT2BQ6NZ67 158 aa15.94■□□□□ 0.14
USP47-205ENST00000525257 ASB13Q8WXK3 278 aa15.94■□□□□ 0.14
USP47-205ENST00000525257 PRADC1Q9BSG0 188 aa15.94■□□□□ 0.14
USP47-205ENST00000525257 MBD2Q9UBB5 411 aa15.94■□□□□ 0.14
USP47-205ENST00000525257 IGHV3-73A0A0B4J1V6 119 aa15.93■□□□□ 0.14
USP47-205ENST00000525257 RHOHQ15669 191 aa15.93■□□□□ 0.14
USP47-205ENST00000525257 ZNF876PQ49A33 203 aa15.93■□□□□ 0.14
USP47-205ENST00000525257 FAM74A1Q5RGS3 127 aa15.93■□□□□ 0.14
USP47-205ENST00000525257 KCNS1Q96KK3 526 aa15.93■□□□□ 0.14
USP47-205ENST00000525257 BOLA1Q9Y3E2 137 aa15.93■□□□□ 0.14
USP47-205ENST00000525257 WFDC2Q14508 124 aa15.92■□□□□ 0.14
USP47-205ENST00000525257 LELP1Q5T871 98 aa15.92■□□□□ 0.14
USP47-205ENST00000525257 CFAP126Q5VTH2 177 aa15.92■□□□□ 0.14
USP47-205ENST00000525257 DPPA3Q6W0C5 159 aa15.92■□□□□ 0.14
USP47-205ENST00000525257 RS1O15537 224 aa15.91■□□□□ 0.14
USP47-205ENST00000525257 C1QBP02746 253 aa15.91■□□□□ 0.14
USP47-205ENST00000525257 GNG5P63218 68 aa15.91■□□□□ 0.14
USP47-205ENST00000525257 SMIM3Q9BZL3 60 aa15.91■□□□□ 0.14
USP47-205ENST00000525257 TRBV6-4A0A1B0GX49 114 aa15.9■□□□□ 0.14
USP47-205ENST00000525257 PLA2G1BP04054 148 aaKnown RBP15.9■□□□□ 0.14
USP47-205ENST00000525257 SCGB1C1Q8TD33 95 aa15.9■□□□□ 0.14
USP47-205ENST00000525257 SGK494Q96LW2 274 aa15.9■□□□□ 0.14
USP47-205ENST00000525257 HSPB11Q9Y547 144 aa15.9■□□□□ 0.14
USP47-205ENST00000525257 CYCSP99999 105 aaKnown RBP15.89■□□□□ 0.13
USP47-205ENST00000525257 LAGE3Q14657 143 aa15.89■□□□□ 0.13
USP47-205ENST00000525257 LINC00528Q8N1L1 170 aa15.89■□□□□ 0.13
USP47-205ENST00000525257 Q8N3U1 123 aa15.89■□□□□ 0.13
USP47-205ENST00000525257 TM2D2Q9BX73 214 aa15.89■□□□□ 0.13
USP47-205ENST00000525257 GTSF1LQ9H1H1 148 aa15.89■□□□□ 0.13
USP47-205ENST00000525257 LECT2O14960 151 aa15.88■□□□□ 0.13
USP47-205ENST00000525257 ASAH1Q13510 395 aa15.88■□□□□ 0.13
USP47-205ENST00000525257 ATP6V0E2Q8NHE4 81 aa15.88■□□□□ 0.13
USP47-205ENST00000525257 ENKURQ8TC29 256 aa15.88■□□□□ 0.13
USP47-205ENST00000525257 PPP1R1CQ8WVI7 109 aa15.88■□□□□ 0.13
USP47-205ENST00000525257 C11orf21Q9P2W6 132 aa15.88■□□□□ 0.13
USP47-205ENST00000525257 CIDEAO60543 219 aa15.87■□□□□ 0.13
USP47-205ENST00000525257 Q6ZSA8 131 aa15.87■□□□□ 0.13
USP47-205ENST00000525257 ARL6IP6Q8N6S5 226 aa15.87■□□□□ 0.13
USP47-205ENST00000525257 HMGB3O15347 200 aaKnown RBP15.86■□□□□ 0.13
USP47-205ENST00000525257 ZNF80P51504 273 aaPredicted RBP15.86■□□□□ 0.13
USP47-205ENST00000525257 H2BFSP57053 126 aa15.86■□□□□ 0.13
USP47-205ENST00000525257 PQLC2Q6ZP29 291 aa15.86■□□□□ 0.13
USP47-205ENST00000525257 NDFIP1Q9BT67 221 aa15.86■□□□□ 0.13
USP47-205ENST00000525257 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.85■□□□□ 0.13
USP47-205ENST00000525257 A0A1W2PPV4 95 aa15.85■□□□□ 0.13
USP47-205ENST00000525257 KRTAP29-1A8MX34 341 aaPredicted RBP15.85■□□□□ 0.13
USP47-205ENST00000525257 ACOT6Q3I5F7 207 aaPredicted RBP15.85■□□□□ 0.13
USP47-205ENST00000525257 ZNF506Q5JVG8 444 aa15.85■□□□□ 0.13
USP47-205ENST00000525257 TMEM75Q8N9X5 138 aa15.85■□□□□ 0.13
USP47-205ENST00000525257 C9orf85Q96MD7 179 aa15.85■□□□□ 0.13
USP47-205ENST00000525257 PGPEP1LA6NFU8 196 aa15.84■□□□□ 0.13
USP47-205ENST00000525257 MGST1P10620 155 aaKnown RBP15.84■□□□□ 0.13
USP47-205ENST00000525257 RPL12P30050 165 aaKnown RBP15.84■□□□□ 0.13
USP47-205ENST00000525257 RAB2AP61019 212 aa15.84■□□□□ 0.13
USP47-205ENST00000525257 MPC2O95563 127 aa15.83■□□□□ 0.12
USP47-205ENST00000525257 LRP1Q07954 4544 aaKnown RBP15.82■□□□□ 0.12
USP47-205ENST00000525257 TAAR5O14804 337 aa15.82■□□□□ 0.12
USP47-205ENST00000525257 GCGP01275 180 aa15.82■□□□□ 0.12
USP47-205ENST00000525257 LINC01620Q4KN68 170 aa15.82■□□□□ 0.12
USP47-205ENST00000525257 DEFB104AQ8WTQ1 72 aa15.82■□□□□ 0.12
USP47-205ENST00000525257 WFDC1Q9HC57 220 aa15.82■□□□□ 0.12
USP47-205ENST00000525257 TRAV8-3A0A0A6YYJ7 113 aa15.81■□□□□ 0.12
USP47-205ENST00000525257 PET100P0DJ07 73 aa15.81■□□□□ 0.12
USP47-205ENST00000525257 DAZ4Q86SG3 579 aaKnown RBP15.81■□□□□ 0.12
USP47-205ENST00000525257 DAZ3Q9NR90 486 aaKnown RBP15.81■□□□□ 0.12
USP47-205ENST00000525257 GAGE12JA6NER3 117 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 ARL14EPLP0DKL9 152 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 GAGE1Q13065 139 aa15.8■□□□□ 0.12
USP47-205ENST00000525257 GAGE4Q13068 117 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms