RNA–Protein interactions for RNA: ENST00000523323.5

ITGB2-222, Transcript of integrin subunit beta 2, human

TSL 2

Gene ITGB2, Length 2,823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB2-222	ENST00000523323	SPATA25	Q9BR10	227 aa		11.69	□□□□□ -0.54
ITGB2-222	ENST00000523323	IGHG2	P01859	326 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	RPL7	P18124	248 aa	Known RBP	11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	DEFB113	Q30KQ7	82 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	PRSS22	Q9GZN4	317 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	SLC25A16	P16260	332 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	FOXE3	Q13461	319 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	TM4SF20	Q53R12	229 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	FAM231D	Q6ZW35	169 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	BOD1L2	Q8IYS8	172 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323		A0A0G2JLM5	398 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	FBLL1	A6NHQ2	334 aa	Known RBP	11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	C2orf70	A6NJV1	201 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	IGF1	P05019	195 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	KRTAP1-3	Q8IUG1	177 aa		11.68	□□□□□ -0.54
ITGB2-222	ENST00000523323	OTOG	Q6ZRI0	2925 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	SEC11A	P67812	179 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	OR4X2	Q8NGF9	303 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	SETX	Q7Z333	2677 aa	Known RBP	11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323		H3BRM9	83 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	SPRY2	O43597	315 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	APCS	P02743	223 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	ARMS2	P0C7Q2	107 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	RPL11	P62913	178 aa	Known RBP	11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	RNF183	Q96D59	192 aa		11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	MRPL16	Q9NX20	251 aa	Known RBP	11.67	□□□□□ -0.54
ITGB2-222	ENST00000523323	TRAV8-2	A0A0B4J237	113 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	SIVA1	O15304	175 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	MT-ND6	P03923	174 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	SCRT2	Q9NQ03	307 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	TMEM189	A5PLL7	270 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	HOXA3	O43365	443 aa	Predicted RBP	11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	ZNF138	P52744	262 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	RAB37	Q96AX2	223 aa		11.66	□□□□□ -0.54
ITGB2-222	ENST00000523323	TMEM97	Q5BJF2	176 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	C20orf173	Q96LM9	149 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	TRBV7-1	A0A0A6YYK4	115 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323		F6UB75	175 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	SNAI2	O43623	268 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	METTL26	Q96S19	204 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	TMEM70	Q9BUB7	260 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	TNFRSF18	Q9Y5U5	241 aa		11.65	□□□□□ -0.54
ITGB2-222	ENST00000523323	SH2D1A	O60880	128 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	C18orf65	Q6ZTR6	163 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	C8orf86	Q6ZUL3	223 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	SMIM20	Q8N5G0	67 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	C18orf32	Q8TCD1	76 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	CSN1S1	P47710	185 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	DSCR9	P59020	149 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	ADAMTSL5	Q6ZMM2	481 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	GLMP	Q8WWB7	406 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	FLNB	O75369	2602 aa	Known RBP	11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323		J3QR89	54 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323	ID1	P41134	155 aa		11.64	□□□□□ -0.55
ITGB2-222	ENST00000523323		A0A1W2PPM0	123 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	TMEM213	A2RRL7	107 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	RNASEK	Q6P5S7	137 aa	Known RBP	11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	C2orf91	Q6ZV80	131 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	FA2H	Q7L5A8	372 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	DPF1	Q92782	380 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	PRR25	Q96S07	402 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323		A8MWL6	223 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	KIR3DS1	Q14943	382 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	GPHB5	Q86YW7	130 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	WIPF2	Q8TF74	440 aa	Predicted RBP	11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323	DUX3	Q96PT4	197 aa		11.63	□□□□□ -0.55
ITGB2-222	ENST00000523323		A0A1B0GXF2	115 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323		A6NDN8	102 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	DEFB136	Q30KP8	78 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	WFDC3	Q8IUB2	231 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	PDE6H	Q13956	83 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	FOXI2	Q6ZQN5	318 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	ZNF575	Q86XF7	245 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	ZNF418	Q8TF45	676 aa	Predicted RBP	11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	CITED1	Q99966	193 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	ZNF492	Q9P255	531 aa		11.62	□□□□□ -0.55
ITGB2-222	ENST00000523323	LYPD1	Q8N2G4	141 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	AGPAT4-IT1	Q9H0P7	198 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	MSRB1	Q9NZV6	116 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	FAM223B	A6NKX1	122 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323		B5MCH6	92 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	NPIPB6	E9PJ23	425 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	SCGB2A1	O75556	95 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	HLA-DQA1	P01909	254 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	CSN3	P07498	182 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	LOXL1	Q08397	574 aa	Predicted RBP	11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	FAM223A	Q8IWN6	122 aa		11.61	□□□□□ -0.55
ITGB2-222	ENST00000523323	IGLV1-40	P01703	118 aa		11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	RPL32	P62910	135 aa	Known RBP	11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	HBB	P68871	147 aa		11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	C11orf44	Q8N8P7	122 aa		11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	FN1	P02751	2386 aa	Known RBP	11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	CT45A10	P0DMU9	189 aa		11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	FABP2	P12104	132 aa		11.6	□□□□□ -0.55
ITGB2-222	ENST00000523323	C16orf92	Q96LL3	132 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 294.5 ms