RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 HRCT1Q6UXD1 115 aa-0.05□□□□□ -2.42
PCM1-217ENST00000522998 OR51A4Q8NGJ6 313 aa-0.05□□□□□ -2.42
PCM1-217ENST00000522998 NAT14Q8WUY8 206 aa-0.05□□□□□ -2.42
PCM1-217ENST00000522998 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
PCM1-217ENST00000522998 CBLN4Q9NTU7 201 aa-0.05□□□□□ -2.42
PCM1-217ENST00000522998 SMPXQ9UHP9 88 aa-0.05□□□□□ -2.42
PCM1-217ENST00000522998 MACF1Q9UPN3 7388 aaKnown RBP-0.05□□□□□ -2.42
PCM1-217ENST00000522998 LOC107984156A0A0G2JMH3 177 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 LOC107984640A0A0U1RRK4 108 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 E7EQ34 232 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 CRYGSP22914 178 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 POLR2HP52434 150 aaKnown RBP-0.06□□□□□ -2.42
PCM1-217ENST00000522998 GTF2A1P52655 376 aaPredicted RBP-0.06□□□□□ -2.42
PCM1-217ENST00000522998 KLKP1Q107X0 134 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 ARL17AQ8IVW1 177 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 TEX29Q8N6K0 151 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.06□□□□□ -2.42
PCM1-217ENST00000522998 OR8J3Q8NGG0 315 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 DMAC1Q96GE9 116 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 WDR97A6NE52 1622 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 KDM6BO15054 1643 aa-0.06□□□□□ -2.42
PCM1-217ENST00000522998 XIRP1Q702N8 1843 aaKnown RBP-0.06□□□□□ -2.42
PCM1-217ENST00000522998 A2MP01023 1474 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 A0A0G2JMM0 328 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 TPST1O60507 370 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 EDF1O60869 148 aaKnown RBP-0.07□□□□□ -2.42
PCM1-217ENST00000522998 RPL22P35268 128 aaKnown RBP-0.07□□□□□ -2.42
PCM1-217ENST00000522998 ETV6P41212 452 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 PPP1R2P3Q6NXS1 205 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 TOMM20LQ6UXN7 152 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 PROK2Q9HC23 129 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 KIDINS220Q9ULH0 1771 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 CPDO75976 1380 aa-0.07□□□□□ -2.42
PCM1-217ENST00000522998 PGRMC1O00264 195 aaKnown RBP-0.08□□□□□ -2.42
PCM1-217ENST00000522998 CDC42EP2O14613 210 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 HBDP02042 147 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 RPL7P18124 248 aaKnown RBP-0.08□□□□□ -2.42
PCM1-217ENST00000522998 LSM3P62310 102 aaKnown RBP-0.08□□□□□ -2.42
PCM1-217ENST00000522998 IDO2Q6ZQW0 420 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 OR5A2Q8NGI9 324 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 OR9Q1Q8NGQ5 310 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 SMIM7Q9BQ49 75 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 CENPHQ9H3R5 247 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 TMEM14BQ9NUH8 114 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 PTPRGP23470 1445 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 PLXNA2O75051 1894 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 RREB1Q92766 1687 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 WNK2Q9Y3S1 2297 aa-0.08□□□□□ -2.42
PCM1-217ENST00000522998 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.09□□□□□ -2.42
PCM1-217ENST00000522998 ABCA2Q9BZC7 2435 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 BLMP54132 1417 aaPredicted RBP-0.09□□□□□ -2.42
PCM1-217ENST00000522998 FXYD1O00168 92 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 UQCRQO14949 82 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 IGKCP01834 107 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 VMO1Q7Z5L0 202 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 OTOSQ8NHW6 89 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 ATG5Q9H1Y0 275 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 TRAPPC2LQ9UL33 140 aa-0.09□□□□□ -2.42
PCM1-217ENST00000522998 CCKP06307 115 aa-0.1□□□□□ -2.43
PCM1-217ENST00000522998 CKS2P33552 79 aa-0.1□□□□□ -2.43
PCM1-217ENST00000522998 TFAMQ00059 246 aaKnown RBP-0.1□□□□□ -2.43
PCM1-217ENST00000522998 OR4S1Q8NGB4 309 aa-0.1□□□□□ -2.43
PCM1-217ENST00000522998 CDK12Q9NYV4 1490 aaPredicted RBP-0.1□□□□□ -2.43
PCM1-217ENST00000522998 LRP5O75197 1615 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 IGHV1-24A0A0C4DH33 117 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 TRBV10-1A0A0K0K1A3 114 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 A0A1B0GV72 72 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 MCRIP1C9JLW8 97 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 M0QZK8 103 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 CD3DP04234 171 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 SLC25A5P05141 298 aaKnown RBP-0.11□□□□□ -2.43
PCM1-217ENST00000522998 MPC1LP0DKB6 136 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 IL7P13232 177 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 ADCYAP1P18509 176 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 TMEM128Q5BJH2 165 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 BRK1Q8WUW1 75 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 CCDC115Q96NT0 180 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 MED23Q9ULK4 1368 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 PBRM1Q86U86 1689 aa-0.11□□□□□ -2.43
PCM1-217ENST00000522998 PLXNA1Q9UIW2 1896 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 NCOR1O75376 2440 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 CHD9Q3L8U1 2897 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 CXorf51AA0A1B0GTR3 108 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 PNMA8CA0A1B0GUJ8 204 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 IFNA21P01568 189 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 FABP1P07148 127 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 RPS28P62857 69 aaKnown RBP-0.12□□□□□ -2.43
PCM1-217ENST00000522998 Q5BKY6 102 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 DDA1Q9BW61 102 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 V9GYQ6 96 aa-0.12□□□□□ -2.43
PCM1-217ENST00000522998 AKAP11Q9UKA4 1901 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 TEX49A0A1B0GTD5 131 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 OR2H2O95918 312 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 SDC4P31431 198 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 S100A5P33763 92 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 POLR2JP52435 117 aaKnown RBP-0.13□□□□□ -2.43
PCM1-217ENST00000522998 IQCJQ1A5X6 159 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 SAMD13Q5VXD3 122 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 UNQ5815/PRO19632Q6UWF5 114 aa-0.13□□□□□ -2.43
PCM1-217ENST00000522998 METTL1Q9UBP6 276 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms