RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 LINC00473A8K010 186 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 SMKR1H3BMG3 65 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 LST1O00453 97 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 EIF4EBP3O60516 100 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-204ENST00000522796 CLPSP04118 112 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 COX6CP09669 75 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 C6orf223Q8N319 242 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 HS3ST6Q96QI5 342 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 C2orf16Q68DN1 1984 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 CABIN1Q9Y6J0 2220 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 RNASE2P10153 161 aaKnown RBP6.29□□□□□ -1.4
HMGB4-204ENST00000522796 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
HMGB4-204ENST00000522796 RSPO4Q2I0M5 234 aaPredicted RBP6.29□□□□□ -1.4
HMGB4-204ENST00000522796 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 LINC00474Q9P2X8 69 aa6.29□□□□□ -1.4
HMGB4-204ENST00000522796 EML6Q6ZMW3 1958 aa6.28□□□□□ -1.4
HMGB4-204ENST00000522796 H7C2G1 150 aa6.28□□□□□ -1.4
HMGB4-204ENST00000522796 COX7A2P2O60397 106 aa6.28□□□□□ -1.4
HMGB4-204ENST00000522796 C10orf113Q5VZT2 155 aa6.28□□□□□ -1.4
HMGB4-204ENST00000522796 PVRIGQ6DKI7 326 aa6.28□□□□□ -1.4
HMGB4-204ENST00000522796 FAM53AQ6NSI3 398 aaPredicted RBP6.28□□□□□ -1.4
HMGB4-204ENST00000522796 LYZL1Q6UWQ5 148 aa6.28□□□□□ -1.4
HMGB4-204ENST00000522796 IGLV2-18A0A075B6J9 118 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 H7BZZ5 65 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 VCYO14598 125 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 Q6JHZ5 121 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 NUP37Q8NFH4 326 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 H0YGG7 62 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 FSTL3O95633 263 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 LAGE3Q14657 143 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 LRRK1Q38SD2 2015 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 C10orf128Q5T292 105 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 Q6ZS46 218 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 PRR25Q96S07 402 aa6.27□□□□□ -1.41
HMGB4-204ENST00000522796 FAM223BA6NKX1 122 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 ECSCRQ19T08 205 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 ICOSQ9Y6W8 199 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 IGLV2-11P01706 119 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 CCKP06307 115 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
HMGB4-204ENST00000522796 XCL1P47992 114 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 DAD1P61803 113 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 LYPD5Q6UWN5 251 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 C16orf47Q6ZP98 133 aaPredicted RBP6.26□□□□□ -1.41
HMGB4-204ENST00000522796 KLHL30-AS1Q8NEE0 82 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 Q9H3A6 140 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 XCL2Q9UBD3 114 aa6.26□□□□□ -1.41
HMGB4-204ENST00000522796 IGHV1OR15-9A0A0B4J2B8 117 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 RBMY1BA6NDE4 496 aaKnown RBP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 RBMY1EA6NEQ0 496 aaKnown RBP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 H0Y8X5 98 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 WNT9BO14905 357 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 RBMY1DP0C7P1 496 aaKnown RBP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 RBMY1A1P0DJD3 496 aaKnown RBP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 RBMY1CP0DJD4 496 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 RBMY1FQ15415 496 aaKnown RBP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 PRNTQ86SH4 94 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 FLVCR1-AS1Q8TAF5 88 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 COL4A6Q14031 1691 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 CEP350Q5VT06 3117 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 SUB1P53999 127 aaKnown RBP eCLIP6.25□□□□□ -1.41
HMGB4-204ENST00000522796 THAP8Q8NA92 274 aa6.25□□□□□ -1.41
HMGB4-204ENST00000522796 BRCA2P51587 3418 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 PRSS2P07478 247 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 NRACQ8N912 160 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 FANCD2OSQ96PS1 177 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 TNRC6BQ9UPQ9 1833 aaKnown RBP6.24□□□□□ -1.41
HMGB4-204ENST00000522796 HTTP42858 3142 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 INAFM2P0DMQ5 153 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
HMGB4-204ENST00000522796 PATE2Q6UY27 113 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 FAM216BQ8N7L0 139 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 VSIG2Q96IQ7 327 aa6.24□□□□□ -1.41
HMGB4-204ENST00000522796 CEP192Q8TEP8 1941 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 DYNAPQ8N1N2 210 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 Q8N2B8 174 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 TMEM75Q8N9X5 138 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 UBALD1Q8TB05 177 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 Q9H8V8 135 aa6.23□□□□□ -1.41
HMGB4-204ENST00000522796 ZNF71Q9NQZ8 489 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-204ENST00000522796 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-204ENST00000522796 TET2Q6N021 2002 aaPredicted RBP6.23□□□□□ -1.41
HMGB4-204ENST00000522796 C2orf83Q53S99 150 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 FAM27BQ5VT28 67 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 FGF23Q9GZV9 251 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-204ENST00000522796 TMEM14BQ9NUH8 114 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 CTSZQ9UBR2 303 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 MUC22E2RYF6 1773 aaPredicted RBP6.22□□□□□ -1.41
HMGB4-204ENST00000522796 TRAV8-3A0A0A6YYJ7 113 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 TRAV3A0A0B4J244 114 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 TMEM30CPA0ZSE6 113 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 M0R378 163 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 NDUFB3O43676 98 aa6.22□□□□□ -1.41
HMGB4-204ENST00000522796 CRIP1P50238 77 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms