RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 Q6AWC8 147 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 AMTNQ6UX39 209 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 A0A1B0GXF2 115 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 RBMY1BA6NDE4 496 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 RBMY1EA6NEQ0 496 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BKO60814 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BJP06899 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 RBMY1DP0C7P1 496 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BOP23527 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BBP33778 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BDP58876 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BCP62807 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST2H2BEQ16778 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 WDR73Q6P4I2 378 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 ATP5L2Q7Z4Y8 100 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BHQ93079 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BNQ99877 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 HIST1H2BMQ99879 126 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 GNB1LQ9BYB4 327 aa11.43□□□□□ -0.58
CTNNA1-236ENST00000522792 ATRQ13535 2644 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 C7orf71A4D174 169 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 OR11H12B2RN74 326 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 S100A8P05109 93 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 CD7P09564 240 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 CDKN1BP46527 198 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 HBBP68871 147 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 OR2K2Q8NGT1 345 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 A0A1B0GUT8 65 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 C5orf52A6NGY3 159 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 LINC00587B1AMM8 73 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 UBE2CO00762 179 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 ANXA2RQ3ZCQ2 193 aa11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-236ENST00000522792 TSPOP30536 169 aa11.41□□□□□ -0.58
CTNNA1-236ENST00000522792 SNRPEP62304 92 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-236ENST00000522792 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
CTNNA1-236ENST00000522792 BORCS7Q96B45 105 aa11.41□□□□□ -0.58
CTNNA1-236ENST00000522792 MAST4O15021 2626 aa11.41□□□□□ -0.58
CTNNA1-236ENST00000522792 COX19Q49B96 90 aa11.4□□□□□ -0.58
CTNNA1-236ENST00000522792 WFDC10AQ9H1F0 79 aa11.4□□□□□ -0.58
CTNNA1-236ENST00000522792 A8MTW9 85 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 HLA-DQA1P01909 254 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 MT-ND6P03923 174 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 CTRLP40313 264 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 RIGQ13278 110 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 BEAN1Q3B7T3 259 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 FBN1P35555 2871 aaKnown RBP11.4□□□□□ -0.59
CTNNA1-236ENST00000522792 NDUFA6P56556 154 aa11.39□□□□□ -0.59
CTNNA1-236ENST00000522792 SLAQ13239 276 aa11.39□□□□□ -0.59
CTNNA1-236ENST00000522792 C9orf66Q5T8R8 295 aa11.39□□□□□ -0.59
CTNNA1-236ENST00000522792 C3orf56Q8N813 242 aa11.39□□□□□ -0.59
CTNNA1-236ENST00000522792 ZNF747Q9BV97 191 aa11.39□□□□□ -0.59
CTNNA1-236ENST00000522792 H3BVH4 76 aa11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 GNRH2O43555 120 aa11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 ZNF324O75467 553 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 APCSP02743 223 aa11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 STHQ8IWL8 128 aa11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 GSN-AS1Q9NRJ2 163 aa11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 FAM159AQ6UWV7 190 aa11.38□□□□□ -0.59
CTNNA1-236ENST00000522792 CRXO43186 299 aaPredicted RBP11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 SPRY2O43597 315 aa11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 RBMY1A1P0DJD3 496 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 RBMY1CP0DJD4 496 aa11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 RBMY1FQ15415 496 aaKnown RBP11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 TWIST1Q15672 202 aa11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 VWFP04275 2813 aa11.37□□□□□ -0.59
CTNNA1-236ENST00000522792 NTF3P20783 257 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 S100A4P26447 101 aaKnown RBP11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 ASIPP42127 132 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 CMC4P56277 68 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 C12orf54Q6X4T0 127 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 OR10AG1Q8NH19 301 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 C19orf73Q9NVV2 129 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 MSRB1Q9NZV6 116 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 INSL3P51460 131 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 TP53TG3Q9ULZ0 132 aa11.36□□□□□ -0.59
CTNNA1-236ENST00000522792 F2Z2F3 143 aa11.35□□□□□ -0.59
CTNNA1-236ENST00000522792 IGLL1P15814 213 aa11.35□□□□□ -0.59
CTNNA1-236ENST00000522792 TRPT1Q86TN4 253 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-236ENST00000522792 A0A1B0GW15 77 aa11.34□□□□□ -0.59
CTNNA1-236ENST00000522792 SNAI2O43623 268 aa11.34□□□□□ -0.59
CTNNA1-236ENST00000522792 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
CTNNA1-236ENST00000522792 CNFNQ9BYD5 112 aa11.34□□□□□ -0.59
CTNNA1-236ENST00000522792 NIT2Q9NQR4 276 aa11.34□□□□□ -0.59
CTNNA1-236ENST00000522792 IGHV1OR15-1A0A075B7D0 117 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 OR5AL1P0C617 328 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 RNASE3P12724 160 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 SRIP30626 198 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 FAM110AQ9BQ89 295 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 XCL2Q9UBD3 114 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 HTN1P15515 57 aa11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-236ENST00000522792 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms