RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RPS20P60866 119 aaKnown RBP15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 FAM159AQ6UWV7 190 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 TSKUQ8WUA8 353 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 C1QTNF4Q9BXJ3 329 aa15.63■□□□□ 0.09
R3HCC1-208ENST00000522012 GRIFINA4D1Z8 144 aa15.62■□□□□ 0.09
R3HCC1-208ENST00000522012 CXorf65A6NEN9 183 aa15.62■□□□□ 0.09
R3HCC1-208ENST00000522012 S100PP25815 95 aa15.61■□□□□ 0.09
R3HCC1-208ENST00000522012 FAM3BP58499 235 aaPredicted RBP15.61■□□□□ 0.09
R3HCC1-208ENST00000522012 LINC01587Q99440 93 aa15.61■□□□□ 0.09
R3HCC1-208ENST00000522012 SMIM27A0A1W2PRY6 76 aa15.6■□□□□ 0.09
R3HCC1-208ENST00000522012 KCNIP4Q6PIL6 250 aa15.6■□□□□ 0.09
R3HCC1-208ENST00000522012 IMMP2LQ96T52 175 aa15.6■□□□□ 0.09
R3HCC1-208ENST00000522012 NEU1Q99519 415 aa15.6■□□□□ 0.09
R3HCC1-208ENST00000522012 C20orf144Q9BQM9 153 aa15.6■□□□□ 0.09
R3HCC1-208ENST00000522012 TMEM208Q9BTX3 173 aa15.6■□□□□ 0.09
R3HCC1-208ENST00000522012 IGHV3OR16-12A0A075B7B8 117 aa15.59■□□□□ 0.09
R3HCC1-208ENST00000522012 IGHV1OR15-1A0A075B7D0 117 aa15.59■□□□□ 0.09
R3HCC1-208ENST00000522012 GNRH2O43555 120 aa15.59■□□□□ 0.09
R3HCC1-208ENST00000522012 HTN1P15515 57 aa15.59■□□□□ 0.09
R3HCC1-208ENST00000522012 APOC4P55056 127 aa15.59■□□□□ 0.09
R3HCC1-208ENST00000522012 KCNS1Q96KK3 526 aa15.59■□□□□ 0.09
R3HCC1-208ENST00000522012 PRB2P02812 416 aaPredicted RBP15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 KPRPQ5T749 579 aaPredicted RBP15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 ZNF575Q86XF7 245 aa15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 C1orf158Q8N1D5 194 aa15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 GTSF1Q8WW33 167 aa15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 TPPP3Q9BW30 176 aa15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 GFRA4Q9GZZ7 299 aa15.58■□□□□ 0.09
R3HCC1-208ENST00000522012 KIR2DL5BA0A0G2JN68 375 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 KIR2DL5BA0A0G2JPC4 375 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 HIGD1CA8MV81 97 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 KIR2DL5AQ8N109 375 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 KIR2DL5BQ8NHK3 375 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 NAT8BQ9UHF3 227 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 GOLT1BQ9Y3E0 138 aa15.58■□□□□ 0.08
R3HCC1-208ENST00000522012 TDRG1Q3Y452 100 aa15.57■□□□□ 0.08
R3HCC1-208ENST00000522012 PGLYRP4Q96LB8 373 aa15.57■□□□□ 0.08
R3HCC1-208ENST00000522012 PYGO2Q9BRQ0 406 aa15.57■□□□□ 0.08
R3HCC1-208ENST00000522012 TP53TG3Q9ULZ0 132 aa15.57■□□□□ 0.08
R3HCC1-208ENST00000522012 A0A1W2PPQ1 181 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 FAM231BA6NCW3 169 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 CBY3A6NI87 242 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 TYMSP04818 313 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 ASIPP42127 132 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 TMEM256Q8N2U0 113 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 CSNK1G2-AS1Q8NCQ2 148 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 NUP35Q8NFH5 326 aa15.56■□□□□ 0.08
R3HCC1-208ENST00000522012 A8MZ25 164 aa15.55■□□□□ 0.08
R3HCC1-208ENST00000522012 S100A4P26447 101 aaKnown RBP15.55■□□□□ 0.08
R3HCC1-208ENST00000522012 ELOBQ15370 118 aa15.55■□□□□ 0.08
R3HCC1-208ENST00000522012 FER1L6-AS1Q8NA97 138 aa15.55■□□□□ 0.08
R3HCC1-208ENST00000522012 TIMM8BQ9Y5J9 83 aaPredicted RBP15.55■□□□□ 0.08
R3HCC1-208ENST00000522012 PKD1L1Q8TDX9 2849 aa15.55■□□□□ 0.08
R3HCC1-208ENST00000522012 SPINK4O60575 86 aa15.54■□□□□ 0.08
R3HCC1-208ENST00000522012 PRM2P04554 102 aa15.54■□□□□ 0.08
R3HCC1-208ENST00000522012 CXCL1P09341 107 aa15.54■□□□□ 0.08
R3HCC1-208ENST00000522012 TGIF2-C20orf24A0A0A6YYL0 155 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 IGLC6P0CF74 106 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 FOXA3P55318 350 aaPredicted RBP15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 LYZL1Q6UWQ5 148 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 LINC00467Q9BRT7 94 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 TRGV11A0A075B6L2 103 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 H3BVH4 76 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 YPEL4Q96NS1 127 aa15.53■□□□□ 0.08
R3HCC1-208ENST00000522012 CMYA5Q8N3K9 4069 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 MUC21A0A0G2JKD1 596 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 MUC21A0A140T8X8 626 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 UBE2CO00762 179 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 ARMS2P0C7Q2 107 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 FRMD6-AS1P0C7T7 363 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 SSTP61278 116 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 BTF3L4Q96K17 158 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 MDFICQ9P1T7 246 aa15.52■□□□□ 0.07
R3HCC1-208ENST00000522012 IGHV3-16A0A0C4DH30 117 aa15.51■□□□□ 0.07
R3HCC1-208ENST00000522012 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.51■□□□□ 0.07
R3HCC1-208ENST00000522012 TRAV9-1A0A075B6T8 112 aa15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 F2Z2F3 143 aa15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 K7EIL1 84 aa15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 DEFB135Q30KP9 77 aa15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 DNLZQ5SXM8 178 aa15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 MRPL54Q6P161 138 aaKnown RBP15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 ZNF705AQ6ZN79 300 aaPredicted RBP15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 BORCS7Q96B45 105 aa15.5■□□□□ 0.07
R3HCC1-208ENST00000522012 RNASE3P12724 160 aaKnown RBP15.49■□□□□ 0.07
R3HCC1-208ENST00000522012 AZU1P20160 251 aa15.49■□□□□ 0.07
R3HCC1-208ENST00000522012 CTRLP40313 264 aa15.49■□□□□ 0.07
R3HCC1-208ENST00000522012 TRBV24-1A0A075B6N3 115 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 COLCA2A8K830 154 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 SPRY2O43597 315 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 DEFB121Q5J5C9 76 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 FAM210BQ96KR6 192 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 SSBP4Q9BWG4 385 aaPredicted RBP15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 A0A1B0GUT8 65 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 SNAI2O43623 268 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 OR5AL1P0C617 328 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 MED14OSP0DP75 135 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 RCHY1Q96PM5 261 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 PHLDA3Q9Y5J5 127 aa15.48■□□□□ 0.07
R3HCC1-208ENST00000522012 ZNF415Q09FC8 603 aa15.47■□□□□ 0.07
R3HCC1-208ENST00000522012 OR10AG1Q8NH19 301 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms