RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	ARL2-SNX15	V9GYD0	113 aa		5.88	□□□□□ -1.47
CTNNA1-231	ENST00000521941	HYDIN	Q4G0P3	5121 aa		5.88	□□□□□ -1.47
CTNNA1-231	ENST00000521941	IGLV2-18	A0A075B6J9	118 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941		M0R2N4	97 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	GNRH2	O43555	120 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SPINK4	O60575	86 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	IGLV2-11	P01706	119 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	H2AFB1	P0C5Y9	115 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	AKR1C3	P42330	323 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SDF2L1	Q9HCN8	221 aa		5.87	□□□□□ -1.47
CTNNA1-231	ENST00000521941	KMT2A	Q03164	3969 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	NACA	E9PAV3	2078 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SCO2	A0A1W2PP80	73 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SFTA3	P0C7M3	94 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	EIF5AL1	Q6IS14	154 aa	Known RBP	5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	DPPA3	Q6W0C5	159 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	POM121L12	Q8N7R1	296 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	MBD3L1	Q8WWY6	194 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	HIST1H2BA	Q96A08	127 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	NKX6-2	Q9C056	277 aa	Predicted RBP	5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	GNG13	Q9P2W3	67 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	C11orf21	Q9P2W6	132 aa		5.86	□□□□□ -1.47
CTNNA1-231	ENST00000521941	IGHV3-16	A0A0C4DH30	117 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	FBLL1	A6NHQ2	334 aa	Known RBP	5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941		C9JCJ5	164 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	PFN1	P07737	140 aa	Known RBP	5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	NKX2-5	P52952	324 aa	Predicted RBP	5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SAPCD1	Q5SSQ6	148 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SLC51B	Q86UW2	128 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	C9orf62	Q8N4C0	152 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	NHLRC2	Q8NBF2	726 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	ZC2HC1A	Q96GY0	325 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	FMC1	Q96HJ9	113 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	KCNS1	Q96KK3	526 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SPX	Q9BT56	116 aa		5.85	□□□□□ -1.47
CTNNA1-231	ENST00000521941	MUC4	Q99102	2169 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	TRGV4	A0A0C4DH28	118 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	TEX46	H3BTG2	121 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941		M0R036	132 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941		M0R2P5	195 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	S100A4	P26447	101 aa	Known RBP	5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	SULT1A2	P50226	295 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	CCL20	P78556	96 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	LGALS9B	Q3B8N2	356 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	TDRG1	Q3Y452	100 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	ZNF479	Q96JC4	524 aa		5.84	□□□□□ -1.47
CTNNA1-231	ENST00000521941	TMSB15B	A0A087X1C1	80 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941		A0A096LPF7	62 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	FABP5P3	A8MUU1	101 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	PAX4	O43316	350 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	SH2D1A	O60880	128 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ORM1	P02763	201 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	RAB5C	P51148	216 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	CCL18	P55774	89 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ALKAL2	Q6UX46	152 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	OR4C5	Q8NGB2	326 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	TCEAL7	Q9BRU2	100 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	MANBAL	Q9NQG1	85 aa		5.83	□□□□□ -1.48
CTNNA1-231	ENST00000521941	IGHV3-73	A0A0B4J1V6	119 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	TRAV4	A0A0B4J268	109 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	IGKV3D-20	A0A0C4DH25	116 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	GRIFIN	A4D1Z8	144 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941		B4DEV8	164 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941		H3BVH4	76 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	LTA	P01374	205 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ASIP	P42127	132 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	RNF212	Q495C1	297 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	FAM162B	Q5T6X4	162 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	PRR27	Q6MZM9	219 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	VSIG2	Q96IQ7	327 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	C18orf15	Q96N68	181 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	PRO0255	Q9UI72	69 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ZFP30	Q9Y2G7	519 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	BOLA1	Q9Y3E2	137 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	LINC00588	Q9Y4M8	146 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ICOS	Q9Y6W8	199 aa		5.82	□□□□□ -1.48
CTNNA1-231	ENST00000521941	VPS13D	Q5THJ4	4388 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	PGPEP1L	A6NFU8	196 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	IFNA1	P01562	189 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	RNASE3	P12724	160 aa	Known RBP	5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	CRIP1	P50238	77 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	CRYBA4	P53673	196 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	FHL2	Q14192	279 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ZNF876P	Q49A33	203 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ZNF506	Q5JVG8	444 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	PCNP	Q8WW12	178 aa	Known RBP	5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	RASL10A	Q92737	203 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	C9orf85	Q96MD7	179 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	DERL1	Q9BUN8	251 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	HHLA3	Q9XRX5	114 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	DNAH6	Q9C0G6	4158 aa		5.81	□□□□□ -1.48
CTNNA1-231	ENST00000521941	TRAV1-1	A0A0B4J248	108 aa		5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	TRBV6-1	A0A0K0K1D8	114 aa		5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	LOC100131303	A0A0U1RQF7	123 aa		5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	MGST1	P10620	155 aa	Known RBP	5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	GYPE	P15421	78 aa		5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	RPL35	P42766	123 aa	Known RBP	5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	RPL19	P84098	196 aa	Known RBP	5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	ESRG	Q1W209	222 aa		5.8	□□□□□ -1.48
CTNNA1-231	ENST00000521941	BAGE2	Q86Y30	109 aa		5.8	□□□□□ -1.48

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