RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 CFAP126Q5VTH2 177 aa8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 SLC25A21Q9BQT8 299 aaPredicted RBP8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 RSL24D1Q9UHA3 163 aaKnown RBP8.42□□□□□ -1.06
SRGAP3-212ENST00000520860 RBAKDNA6NC62 111 aa8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 RPL29P47914 159 aaKnown RBP8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 CTF1Q16619 201 aa8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 ZC2HC1AQ96GY0 325 aa8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 C20orf85Q9H1P6 137 aa8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 SDF2L1Q9HCN8 221 aa8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
SRGAP3-212ENST00000520860 GAGE12JA6NER3 117 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 TYMSP04818 313 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 NBEAP1P0C6P0 100 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 CAV2P51636 162 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 GAGE1Q13065 139 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 GAGE4Q13068 117 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 GAGE5Q13069 117 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 ELOBQ15370 118 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 GAGE13Q4V321 117 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 NIT1Q86X76 327 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 CYB561D1Q8N8Q1 229 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 OR10G9Q8NGN4 311 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 NAA50Q9GZZ1 169 aaKnown RBP8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 WDR83OSQ9Y284 106 aa8.4□□□□□ -1.06
SRGAP3-212ENST00000520860 A6NHS1 94 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 PANO1I0J062 215 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 INPP1P49441 399 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 AP3S2P59780 193 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 BAXQ07812 192 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 Q0VG73 95 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 IAH1Q2TAA2 248 aaPredicted RBP8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 KCNIP4Q6PIL6 250 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 ATRAIDQ6UW56 229 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 C9orf163Q8N9P6 203 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 KCNS1Q96KK3 526 aa8.39□□□□□ -1.07
SRGAP3-212ENST00000520860 A0A087WX48 190 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 TRAV21A0A0B4J279 112 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 C7orf66A4D0T2 115 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 USP17L23D6RBM5 183 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 L7N2F9 121 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 VAMP2P63027 116 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 SLC25A2Q9BXI2 301 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 GSKIPQ9P0R6 139 aa8.38□□□□□ -1.07
SRGAP3-212ENST00000520860 UBE2L5PA0A1B0GUS4 154 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 C9orf170A2RU37 121 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 DIRC3C9JPN6 131 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 LINC00694P0DN24 101 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 TOMM5Q8N4H5 51 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 ASB13Q8WXK3 278 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 PHYHIPLQ96FC7 376 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 CHCHD7Q9BUK0 85 aa8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 RBM38Q9H0Z9 239 aaKnown RBP8.37□□□□□ -1.07
SRGAP3-212ENST00000520860 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 PGPA6NDG6 321 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 CST7O76096 145 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 BCAP31P51572 246 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 DPH3Q96FX2 82 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 FAM167A-AS1Q96KT0 104 aa8.36□□□□□ -1.07
SRGAP3-212ENST00000520860 HLA-DQA1P01909 254 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 MBPP02686 304 aaPredicted RBP8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 PRSS1P07477 247 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 FGF8P55075 233 aaPredicted RBP8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 RANP62826 216 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 RPL19P84098 196 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 GCSAMLQ5JQS6 135 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 DMRTA1Q5VZB9 504 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 MIR17HGQ75NE6 70 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 CHAC2Q8WUX2 184 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 TMED6Q8WW62 240 aa8.35□□□□□ -1.07
SRGAP3-212ENST00000520860 F6UZH7 168 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 H3BMQ9 156 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 CRPP02741 224 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 FGF7P21781 194 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 ZNF506Q5JVG8 444 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 WDR73Q6P4I2 378 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 FXYD5Q96DB9 178 aa8.34□□□□□ -1.07
SRGAP3-212ENST00000520860 PGPEP1LA6NFU8 196 aa8.33□□□□□ -1.08
SRGAP3-212ENST00000520860 OR2T35Q8NGX2 323 aa8.33□□□□□ -1.08
SRGAP3-212ENST00000520860 TRIM63Q969Q1 353 aa8.33□□□□□ -1.08
SRGAP3-212ENST00000520860 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
SRGAP3-212ENST00000520860 TREM1Q9NP99 234 aa8.33□□□□□ -1.08
SRGAP3-212ENST00000520860 A0A087WYN8 130 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 PHOX2AO14813 284 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 OR7C2O60412 319 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 S100A11P31949 105 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 ZFP2Q6ZN57 461 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 DEDD2Q8WXF8 326 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 PTH2Q96A98 100 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
SRGAP3-212ENST00000520860 SAMD10Q9BYL1 202 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms