RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	IQSEC2	Q5JU85	1478 aa		0.97	□□□□□ -2.25
EFCAB13-208	ENST00000520776	LRRC9	Q6ZRR7	1453 aa		0.97	□□□□□ -2.25
EFCAB13-208	ENST00000520776	MLH3	Q9UHC1	1453 aa		0.97	□□□□□ -2.25
EFCAB13-208	ENST00000520776	RIMS1	Q86UR5	1692 aa	Known RBP	0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TARBP1	Q13395	1621 aa	Known RBP	0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TRAV27	A0A087WT01	109 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776		A0A087WXM4	84 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TRBV7-6	A0A0J9YX20	115 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776		M0R2Z0	102 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	GNG7	O60262	68 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	DNAL4	O96015	105 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	IGF2	P01344	180 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	RBP2	P50120	134 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	AKR1D1	P51857	326 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CLLU1	Q5K131	121 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	GLYATL3	Q5SZD4	288 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TMEM244	Q5VVB8	128 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	LINC00305	Q7Z4B0	112 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	OR5AS1	Q8N127	324 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	OR51A4	Q8NGJ6	313 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TMEM203	Q969S6	136 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	NIT2	Q9NQR4	276 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CALML5	Q9NZT1	146 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ERG28	Q9UKR5	140 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TNFSF18	Q9UNG2	199 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TTC37	Q6PGP7	1564 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CUX1	P39880	1505 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ARHGEF12	Q9NZN5	1544 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	MED14	O60244	1454 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ATP10B	O94823	1461 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ARHGAP35	Q9NRY4	1499 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ABCC5	O15440	1437 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TRO	Q12816	1431 aa	Predicted RBP	0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ANKAR	Q7Z5J8	1434 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ITSN2	Q9NZM3	1697 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	EIF4G3	O43432	1585 aa	Known RBP	0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	NUPR1	O60356	82 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	LINC00694	P0DN24	101 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	IL7	P13232	177 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ETV6	P41212	452 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C8orf59	Q8N0T1	100 aa	Predicted RBP	0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C4orf33	Q8N1A6	199 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C1orf54	Q8WWF1	131 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	MAGOHB	Q96A72	148 aa	Known RBP	0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C14orf144	Q96I85	54 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	LXN	Q9BS40	222 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	SCP2D1	Q9UJQ7	156 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	EFCAB5	A4FU69	1503 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	LRRC7	Q96NW7	1537 aa		0.96	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CDC42BPA	Q5VT25	1732 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	A2M	P01023	1474 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	COL1A1	P02452	1464 aa	Predicted RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	MBD5	Q9P267	1494 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CROCC2	H7BZ55	1655 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	FGD6	Q6ZV73	1430 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	NSD3	Q9BZ95	1437 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TOP2B	Q02880	1626 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TMEM2	Q9UHN6	1383 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	KDM5C	P41229	1560 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	DSPP	Q9NZW4	1301 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	SYCP2	Q9BX26	1530 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TRAV13-1	A0A0B4J241	112 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	PNMA8C	A0A1B0GUJ8	204 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C5orf67	F2Z3F1	127 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776		H3BMG7	143 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TPST1	O60507	370 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	IFNA17	P01571	189 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	IGLC6	P0CF74	106 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	HIST1H1B	P16401	226 aa	Known RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	PKIA	P61925	76 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	NCS1	P62166	190 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	RPS25	P62851	125 aa	Known RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	LINC00322	Q6ZN03	302 aa	Predicted RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C9orf62	Q8N4C0	152 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	FAM216B	Q8N7L0	139 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	AP1S3	Q96PC3	154 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	METTL1	Q9UBP6	276 aa	Known RBP	0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	PZP	P20742	1482 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ERVK-7	P63135	1459 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	CFAP43	Q8NDM7	1665 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	BIVM-ERCC5	R4GMW8	1640 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	SYNJ1	O43426	1573 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	LAMC3	Q9Y6N6	1575 aa		0.95	□□□□□ -2.26
EFCAB13-208	ENST00000520776	ATP7A	Q04656	1500 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	HMGXB3	Q12766	1538 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	EDF1	O60869	148 aa	Known RBP	0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	MT-ND6	P03923	174 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TCRA	P04437	139 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	TSPAN19	P0C672	248 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	RPL22	P35268	128 aa	Known RBP	0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	FOXA3	P55318	350 aa	Predicted RBP	0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	NDUFA6	P56556	154 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	DCD	P81605	110 aa	Known RBP	0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	EMX2	Q04743	252 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	DIAPH2-AS1	Q14236	149 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776		Q5BKY6	102 aa		0.94	□□□□□ -2.26
EFCAB13-208	ENST00000520776	C10orf82	Q8WW14	230 aa		0.94	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms