RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 TRAV2A0A0B4J234 112 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 TRAV21A0A0B4J279 112 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 TMEM213A2RRL7 107 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 ARMS2P0C7Q2 107 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 IGLC6P0CF74 106 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 RAB4AP20338 218 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 HOXD3P31249 432 aaPredicted RBP4.4□□□□□ -1.71
CD47-205ENST00000517766 CTRLP40313 264 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 SYNJ2BPP57105 145 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 SNRPD3P62318 126 aaKnown RBP4.4□□□□□ -1.71
CD47-205ENST00000517766 CACNG7P62955 275 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 FHL2Q14192 279 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 IQCJQ1A5X6 159 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 LYZL1Q6UWQ5 148 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 Q71RC1 249 aaPredicted RBP4.4□□□□□ -1.71
CD47-205ENST00000517766 OR8A1Q8NGG7 326 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 DCANP1Q8TF63 244 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 DUX5Q96PT3 197 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 ODF3Q96PU9 254 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 TM2D2Q9BX73 214 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 C16orf95Q9H693 158 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 COL12A1Q99715 3063 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 ZFYVE26Q68DK2 2539 aa4.4□□□□□ -1.71
CD47-205ENST00000517766 UTP20O75691 2785 aaKnown RBP4.4□□□□□ -1.71
CD47-205ENST00000517766 IGKV3-7A0A075B6H7 116 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 TMSB15BA0A087X1C1 80 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 C2orf70A6NJV1 201 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 PRSS47A8MTI9 375 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 K7EQG2 157 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 NUPR1O60356 82 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 ZNF324O75467 553 aaPredicted RBP4.39□□□□□ -1.71
CD47-205ENST00000517766 HSBP1O75506 76 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 DUSP14O95147 198 aaKnown RBP4.39□□□□□ -1.71
CD47-205ENST00000517766 PRB4P10163 310 aaPredicted RBP4.39□□□□□ -1.71
CD47-205ENST00000517766 PMCHP20382 165 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 LEPP41159 167 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 AMTP48728 403 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
CD47-205ENST00000517766 APRG1Q8IVJ8 170 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 OR1N2Q8NGR9 330 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 CHCHD1Q96BP2 118 aaKnown RBP4.39□□□□□ -1.71
CD47-205ENST00000517766 FAM19A4Q96LR4 140 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 TPPP3Q9BW30 176 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 CNFNQ9BYD5 112 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 TMEM191AQ9H0A3 160 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 MS4A6AQ9H2W1 248 aa4.39□□□□□ -1.71
CD47-205ENST00000517766 EPG5Q9HCE0 2579 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 FBN2P35556 2912 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 IGHV4-4A0A075B6R2 117 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 A0A1B0GUS0 222 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 PCP4L1A6NKN8 68 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 SNAI2O43623 268 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 OR5AL1P0C617 328 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 SRD5A1P18405 259 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 NTF3P20783 257 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 HILS1P60008 231 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 TWIST1Q15672 202 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 TCTEX1D4Q5JR98 221 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 EBLN2Q6P2I7 272 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 SMIM15Q7Z3B0 74 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 NIT1Q86X76 327 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 ZFAND2AQ8N6M9 145 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 KLHL30-AS1Q8NEE0 82 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 OR9G4Q8NGQ1 327 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 LRRK2Q5S007 2527 aa4.38□□□□□ -1.71
CD47-205ENST00000517766 USP9YO00507 2555 aaPredicted RBP4.38□□□□□ -1.71
CD47-205ENST00000517766 PTPN13Q12923 2485 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 TRAV25A0A0B4J276 109 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 KLLNB2CW77 178 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 NDUFA7O95182 113 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 PPBPP02775 128 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 LINC00614P0C842 121 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 ZNF705DP0CH99 300 aaPredicted RBP4.37□□□□□ -1.71
CD47-205ENST00000517766 ZNF705BP0CI00 300 aaPredicted RBP4.37□□□□□ -1.71
CD47-205ENST00000517766 EDN2P20800 178 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 TSPOP30536 169 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 RNASEKQ6P5S7 137 aaKnown RBP4.37□□□□□ -1.71
CD47-205ENST00000517766 FOXI2Q6ZQN5 318 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 ORMDL3Q8N138 153 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 DYNLRB2Q8TF09 96 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 RCHY1Q96PM5 261 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 ESM1Q9NQ30 184 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 GSN-AS1Q9NRJ2 163 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 NAGKQ9UJ70 344 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 LAMTOR2Q9Y2Q5 125 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 TSSC4Q9Y5U2 329 aaPredicted RBP4.37□□□□□ -1.71
CD47-205ENST00000517766 U3KQK5 164 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 CRYBG3Q68DQ2 2970 aa4.37□□□□□ -1.71
CD47-205ENST00000517766 A0A0J9YX75 114 aa4.36□□□□□ -1.71
CD47-205ENST00000517766 D6R8Y8 96 aa4.36□□□□□ -1.71
CD47-205ENST00000517766 F6UB75 175 aa4.36□□□□□ -1.71
CD47-205ENST00000517766 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
CD47-205ENST00000517766 M0R2Z0 102 aa4.36□□□□□ -1.71
CD47-205ENST00000517766 CSN3P07498 182 aa4.36□□□□□ -1.71
CD47-205ENST00000517766 ZNF688P0C7X2 276 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms