RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 COPZ2Q9P299 210 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 ASCC3Q8N3C0 2202 aaKnown RBP0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 CPDO75976 1380 aa0.9□□□□□ -2.27
RNU6-840P-201ENST00000517275 ROS1P08922 2347 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 NINQ8N4C6 2090 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 ADCYAP1P18509 176 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 LYPD5Q6UWN5 251 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 SLC25A26Q70HW3 274 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 ATP6V0E2Q8NHE4 81 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 LIMD2Q9BT23 127 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 TPT1P8Q9HAU6 139 aa0.89□□□□□ -2.27
RNU6-840P-201ENST00000517275 FBN3Q75N90 2809 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 KIAA1549LQ6ZVL6 1849 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 TRBV20-1A0A075B6N2 111 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 TRAV23DV6A0A075B6W5 121 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 A0A0G2JMM0 328 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 TMEM30CPA0ZSE6 113 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 LINC00694P0DN24 101 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 NCS1P62166 190 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 ATOH7Q8N100 152 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 PPDPFLQ8WWR9 84 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 TCEAL4Q96EI5 215 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 DMAC1Q96GE9 116 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 SAR1AQ9NR31 198 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 MRPL36Q9P0J6 103 aaKnown RBP0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 CRCT1Q9UGL9 99 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 PEAK1Q9H792 1746 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 PRG4Q92954 1404 aaPredicted RBP0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 FANCMQ8IYD8 2048 aa0.88□□□□□ -2.27
RNU6-840P-201ENST00000517275 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 PHRF1Q9P1Y6 1649 aaKnown RBP0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 CXorf51AA0A1B0GTR3 108 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 A0A1W2PPM0 123 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 HIGD1CA8MV81 97 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 J3QR89 54 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 M0R2Z0 102 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 RBP4P02753 201 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 C10orf99Q6UWK7 81 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 TAS2R8Q9NYW2 309 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 LSM2Q9Y333 95 aaKnown RBP0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 E9PCH4 1651 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 KDM5CP41229 1560 aa0.87□□□□□ -2.27
RNU6-840P-201ENST00000517275 KIDINS220Q9ULH0 1771 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 K7EIL1 84 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 TPST1O60507 370 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 XAF1Q6GPH4 301 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 NDUFA11Q86Y39 141 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 CTAGE3PQ8IX95 158 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 PFDN5Q99471 154 aa0.86□□□□□ -2.27
RNU6-840P-201ENST00000517275 PTPRDP23468 1912 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 ZGRF1Q86YA3 2104 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 NDUFA2O43678 99 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 COX4I1P13073 169 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 RPL37AP61513 92 aaKnown RBP0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 CLLU1Q5K131 121 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 Q6ZQY7 126 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 VPS25Q9BRG1 176 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 SMIM3Q9BZL3 60 aa0.85□□□□□ -2.27
RNU6-840P-201ENST00000517275 CTTNBP2Q8WZ74 1663 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 SOGA1O94964 1423 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 NBDYA0A0U1RRE5 68 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 NPFFO15130 113 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 DYNLRB2Q8TF09 96 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 CCL19Q99731 98 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 ATG5Q9H1Y0 275 aa0.84□□□□□ -2.27
RNU6-840P-201ENST00000517275 TENM1Q9UKZ4 2725 aa0.84□□□□□ -2.28
RNU6-840P-201ENST00000517275 CITO14578 2027 aa0.84□□□□□ -2.28
RNU6-840P-201ENST00000517275 MYH1P12882 1939 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 TRBV10-1A0A0K0K1A3 114 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 TRBV30A0A0K0K1B3 111 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 FAM236AA0A1B0GUQ0 79 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 FAM236BA0A1B0GV22 79 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 CCDC179H3BU77 68 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 PITX3O75364 302 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 IGKCP01834 107 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 POLR2JP52435 117 aaKnown RBP0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 RPS25P62851 125 aaKnown RBP0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 CCDC58Q4VC31 144 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 SDF2Q99470 211 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 ERG28Q9UKR5 140 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 NOP16Q9Y3C1 178 aaKnown RBP0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 SYNJ1O43426 1573 aa0.83□□□□□ -2.28
RNU6-840P-201ENST00000517275 HELZP42694 1942 aaKnown RBP0.82□□□□□ -2.28
RNU6-840P-201ENST00000517275 K7EP13 123 aa0.82□□□□□ -2.28
RNU6-840P-201ENST00000517275 CAV3P56539 151 aa0.82□□□□□ -2.28
RNU6-840P-201ENST00000517275 SCIMPQ6UWF3 145 aa0.82□□□□□ -2.28
RNU6-840P-201ENST00000517275 SNX29P2Q8IUI4 249 aa0.82□□□□□ -2.28
RNU6-840P-201ENST00000517275 CCDC171Q6TFL3 1326 aa0.82□□□□□ -2.28
RNU6-840P-201ENST00000517275 SPAG17Q6Q759 2223 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 LAMA4Q16363 1823 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 J3QLW9 94 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 CCKP06307 115 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 SELENOWP63302 87 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 SARNPP82979 210 aaKnown RBP0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 FXYD3Q14802 87 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 Q6ZS92 163 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 C5orf56Q8N8D9 126 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 ADGRB1O14514 1584 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms