RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 KRTAP17-1Q9BYP8 105 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 KRTAP1-5Q9BYS1 174 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.9
TCOF1-215ENST00000515516 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 TRAV9-2A0A087WT02 112 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 TRAV4A0A0B4J268 109 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 IGHV3-16A0A0C4DH30 117 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 ZFP69Q49AA0 526 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 LYPD5Q6UWN5 251 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 SGK494Q96LW2 274 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 TXNDC17Q9BRA2 123 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 TNFSF18Q9UNG2 199 aa9.39□□□□□ -0.91
TCOF1-215ENST00000515516 FXYD6-FXYD2A0A087WZ82 144 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 C9JCJ5 164 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 TAAR5O14804 337 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 TCRAP04437 139 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 TYMSP04818 313 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 GYPEP15421 78 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 SUMO1P63165 101 aaKnown RBP9.38□□□□□ -0.91
TCOF1-215ENST00000515516 TVP23CQ96ET8 276 aa9.38□□□□□ -0.91
TCOF1-215ENST00000515516 KIAA1109Q2LD37 5005 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 FBLL1A6NHQ2 334 aaKnown RBP9.37□□□□□ -0.91
TCOF1-215ENST00000515516 K7EQD1 137 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 LINC00315P59091 139 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 Q5BKY6 102 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 SH3BGRL3Q9H299 93 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 EPDR1Q9UM22 224 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 PSG8Q9UQ74 426 aa9.37□□□□□ -0.91
TCOF1-215ENST00000515516 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
TCOF1-215ENST00000515516 EREGO14944 169 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 SMUG1Q53HV7 270 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 SAPCD1Q5SSQ6 148 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 RPL7L1Q6DKI1 246 aaKnown RBP9.36□□□□□ -0.91
TCOF1-215ENST00000515516 SH2D6Q7Z4S9 175 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 PRNTQ86SH4 94 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 CYB561D1Q8N8Q1 229 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 OR2T35Q8NGX2 323 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 LY96Q9Y6Y9 160 aa9.36□□□□□ -0.91
TCOF1-215ENST00000515516 GCGP01275 180 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 IFNA7P01567 189 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 EVI2AP22794 236 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 PPT1P50897 306 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
TCOF1-215ENST00000515516 ZNF876PQ49A33 203 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 AKR1C8PQ5T2L2 129 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 TMEM75Q8N9X5 138 aa9.35□□□□□ -0.91
TCOF1-215ENST00000515516 CTXND1A0A1B0GTU2 59 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 A0A1W2PRE2 83 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 K7EP13 123 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 CIDEAO60543 219 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 CDK2AP2O75956 126 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 PFN1P07737 140 aaKnown RBP9.34□□□□□ -0.91
TCOF1-215ENST00000515516 RGS21Q2M5E4 152 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 NHLRC2Q8NBF2 726 aa9.34□□□□□ -0.91
TCOF1-215ENST00000515516 RNF222A6NCQ9 220 aa9.33□□□□□ -0.92
TCOF1-215ENST00000515516 ZNF80P51504 273 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-215ENST00000515516 PRADC1Q9BSG0 188 aa9.33□□□□□ -0.92
TCOF1-215ENST00000515516 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
TCOF1-215ENST00000515516 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
TCOF1-215ENST00000515516 UBE2G2P60604 165 aa9.32□□□□□ -0.92
TCOF1-215ENST00000515516 ERVFC1-1P60608 527 aa9.32□□□□□ -0.92
TCOF1-215ENST00000515516 RS1O15537 224 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 IGLV2-11P01706 119 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 GATA1P15976 413 aaPredicted RBP9.31□□□□□ -0.92
TCOF1-215ENST00000515516 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 C10orf126Q8N4M7 172 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 MSRB1Q9NZV6 116 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 C11orf21Q9P2W6 132 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 MUC4Q99102 2169 aa9.31□□□□□ -0.92
TCOF1-215ENST00000515516 TRAV8-6A0A0B4J262 113 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 TRAV34A0A0B4J273 112 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 LOC100131303A0A0U1RQF7 123 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 FABP5P3A8MUU1 101 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 PEX7O00628 323 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 ARPC5O15511 151 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 CRYGDP07320 174 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 FGF8P55075 233 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-215ENST00000515516 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 RHOHQ15669 191 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 ZNF726P1Q15940 193 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 Q6ZRN7 208 aaPredicted RBP9.3□□□□□ -0.92
TCOF1-215ENST00000515516 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 STOML3Q8TAV4 291 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 HIST1H2BAQ96A08 127 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 PTH2Q96A98 100 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 LINC00479Q96M42 142 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 C9orf85Q96MD7 179 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 ARL2-SNX15V9GYD0 113 aa9.3□□□□□ -0.92
TCOF1-215ENST00000515516 IGHV3-73A0A0B4J1V6 119 aa9.29□□□□□ -0.92
TCOF1-215ENST00000515516 TRBV6-4A0A1B0GX49 114 aa9.29□□□□□ -0.92
TCOF1-215ENST00000515516 DNAH10OSP0CZ25 163 aa9.29□□□□□ -0.92
TCOF1-215ENST00000515516 TIRAPP58753 221 aa9.29□□□□□ -0.92
TCOF1-215ENST00000515516 ZNF506Q5JVG8 444 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms