RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 USP9XQ93008 2570 aaPredicted RBP4.6□□□□□ -1.67
NPHP3-211ENST00000515289 IGKV1D-37A0A075B6S9 117 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 HMGB3O15347 200 aaKnown RBP4.6□□□□□ -1.67
NPHP3-211ENST00000515289 LINC00614P0C842 121 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 OR10J1P30954 320 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 TCL1AP56279 114 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 TNFRSF19Q9NS68 423 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 HILPDAQ9Y5L2 63 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 ARHGAP32A7KAX9 2087 aa4.6□□□□□ -1.67
NPHP3-211ENST00000515289 A0A096LNT2 108 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 C7orf77A4D0Y5 90 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 CYB5BO43169 146 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 IFNA1P01562 189 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 REG1AP05451 166 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 OR5G3P0C626 314 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 NDPQ00604 133 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 MMDQ15546 238 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 CYP2G1PQ6ZSU1 146 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 Q8N976 141 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.59□□□□□ -1.67
NPHP3-211ENST00000515289 OR1P1Q8NH06 330 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 ZNF414Q96IQ9 312 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 ZNF462Q96JM2 2506 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 YPEL4Q96NS1 127 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 LINC01587Q99440 93 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 MANBALQ9NQG1 85 aa4.59□□□□□ -1.67
NPHP3-211ENST00000515289 AKAP6Q13023 2319 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 A6NDX4 124 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 TMEM250H0YL14 139 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 H3BQ15 152 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 I3L2K1 104 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 BPY2O14599 106 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 TCF21O43680 179 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 COX7A2P2O60397 106 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 TLX1NBP0CAT3 122 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 ARL14EPLP0DKL9 152 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 NPPCP23582 126 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 CD24P25063 80 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 GCHFRP30047 84 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 AKR1C3P42330 323 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 PSMB3P49720 205 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 MEF2BQ02080 365 aaPredicted RBP4.58□□□□□ -1.68
NPHP3-211ENST00000515289 RHEBQ15382 184 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 SMUG1Q53HV7 270 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 MIR17HGQ75NE6 70 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 GTSCR1Q86UQ5 136 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 NIT1Q86X76 327 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 Q8N9W7 124 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 OR2T10Q8NGZ9 312 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 FXYD5Q96DB9 178 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 ACY3Q96HD9 319 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 FAM167A-AS1Q96KT0 104 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
NPHP3-211ENST00000515289 SPTAN1Q13813 2472 aaKnown RBP4.57□□□□□ -1.68
NPHP3-211ENST00000515289 ABCA2Q9BZC7 2435 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 NAV3Q8IVL0 2385 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 MED13LQ71F56 2210 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 IGHV7-4-1A0A0J9YVY3 117 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 CENPVL3A0A0U1RRI6 287 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 TCRBV4S1A1TA0A5B7 111 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 COLCA2A8K830 154 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 K7EIM0 57 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 PHOX2AO14813 284 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 NPFFO15130 113 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 CXorf1O96002 111 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 MT-CO2P00403 227 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 APELAP0DMC3 54 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 COX6B1P14854 86 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 ATP5G3P48201 142 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 RHOBP62745 196 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 FXYD3Q14802 87 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 GFI1BQ5VTD9 330 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 PATE2Q6UY27 113 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 MALSU1Q96EH3 234 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 TVP23CQ96ET8 276 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 TRGV9Q99603 122 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 ANAPC13Q9BS18 74 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 TUBA4BQ9H853 241 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 FUT9Q9Y231 359 aa4.57□□□□□ -1.68
NPHP3-211ENST00000515289 YTHDF2Q9Y5A9 579 aaKnown RBP4.57□□□□□ -1.68
NPHP3-211ENST00000515289 DCHS2Q6V1P9 2916 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 EPG5Q9HCE0 2579 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 A0A087WWC5 75 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 C11orf94C9JXX5 98 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 CORTO00230 105 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 PLXNB1O43157 2135 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 IGHV1-69P01742 117 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 HLA-DRB1P01911 266 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 ZNF688P0C7X2 276 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 IGLC1P0CG04 106 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 ZNF90Q03938 601 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 HES1Q14469 280 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 PLGLAQ15195 96 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 KLK9Q2XQG4 91 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 C1orf195Q5TG92 126 aa4.56□□□□□ -1.68
NPHP3-211ENST00000515289 FAM78BQ5VT40 261 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms