RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TCRAP04437 139 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 SLC25A5P05141 298 aaKnown RBP0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 CKS2P33552 79 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 PCBD1P61457 104 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 LSM3P62310 102 aaKnown RBP0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 CCSMST1Q4G0I0 132 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 LINC00208Q96KT6 92 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 JPT1Q9UK76 154 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 MED13LQ71F56 2210 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 ABCA4P78363 2273 aa0.54□□□□□ -2.32
HMGCS1-207ENST00000514610 UNC13AQ9UPW8 1703 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 IGHV1-24A0A0C4DH33 117 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 FXYD1O00168 92 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 TPST1O60507 370 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 SPINK7P58062 85 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 ZNF56Q15929 161 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 LYPD5Q6UWN5 251 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 OR8I2Q8N0Y5 310 aa0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 MRPL35Q9NZE8 188 aaKnown RBP0.53□□□□□ -2.32
HMGCS1-207ENST00000514610 UQCRQO14949 82 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 DPM2O94777 84 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 IGF2P01344 180 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 SDC4P31431 198 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 B2MP61769 119 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 PSPHP78330 225 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 HSD17B12Q53GQ0 312 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 IDO2Q6ZQW0 420 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 C5orf56Q8N8D9 126 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 C19orf12Q9NSK7 152 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 GINS2Q9Y248 185 aa0.52□□□□□ -2.33
HMGCS1-207ENST00000514610 MT-ND4LP03901 98 aa0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 ADCYAP1P18509 176 aa0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 OR8B8Q15620 311 aa0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 ZCCHC6Q5VYS8 1495 aaKnown RBP0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 Q5XG85 94 aa0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 C10orf99Q6UWK7 81 aa0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 HSPB11Q9Y547 144 aa0.51□□□□□ -2.33
HMGCS1-207ENST00000514610 CDK5RAP2Q96SN8 1893 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 KIF13AQ9H1H9 1805 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 CASZ1Q86V15 1759 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 PTPRGP23470 1445 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 ARHGAP31Q2M1Z3 1444 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 TRAV36DV7A0A075B6V5 113 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 A0A0G2JMM0 328 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 UNQ5815/PRO19632Q6UWF5 114 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 SMR3AQ99954 134 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 PLAC8Q9NZF1 115 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 CALML5Q9NZT1 146 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 TANC1Q9C0D5 1861 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 MAST4O15021 2626 aa0.5□□□□□ -2.33
HMGCS1-207ENST00000514610 TNCP24821 2201 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 PNMA8CA0A1B0GUJ8 204 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 HIGD1CA8MV81 97 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 PAEPP09466 180 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 RHOHQ15669 191 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 OR4S1Q8NGB4 309 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 DMAC1Q96GE9 116 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 METTL1Q9UBP6 276 aaKnown RBP0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 JMJD1CQ15652 2540 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
HMGCS1-207ENST00000514610 F5P12259 2224 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 TRAV17A0A0B4J275 112 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 NBEAP1P0C6P0 100 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 KRTAP2-3P0C7H8 128 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 HIST1H1BP16401 226 aaKnown RBP0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 DEFB132Q7Z7B7 95 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 KRTAP2-4Q9BYR9 128 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 KRTAP2-1Q9BYU5 128 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 SLC35B3Q9H1N7 401 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 ATG5Q9H1Y0 275 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 BANF2Q9H503 90 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 MYH6P13533 1939 aa0.48□□□□□ -2.33
HMGCS1-207ENST00000514610 CACNA1HO95180 2353 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 MACF1Q9UPN3 7388 aaKnown RBP0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 A0A1B0GW64 132 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 DEGS1O15121 323 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 TFF1P04155 84 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 CD3DP04234 171 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 POLR2JP52435 117 aaKnown RBP0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 RPL37P61927 97 aaKnown RBP0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 SPINK13Q1W4C9 94 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 TAC4Q86UU9 113 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 ARAP1Q96P48 1450 aa0.47□□□□□ -2.33
HMGCS1-207ENST00000514610 A0A1B0GX51 115 aa0.46□□□□□ -2.34
HMGCS1-207ENST00000514610 CMPK1P30085 196 aa0.46□□□□□ -2.34
HMGCS1-207ENST00000514610 RPS28P62857 69 aaKnown RBP0.46□□□□□ -2.34
HMGCS1-207ENST00000514610 ASB16-AS1Q495Z4 193 aa0.46□□□□□ -2.34
HMGCS1-207ENST00000514610 TSKUQ8WUA8 353 aa0.46□□□□□ -2.34
HMGCS1-207ENST00000514610 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
HMGCS1-207ENST00000514610 CPDO75976 1380 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 TNS1Q9HBL0 1735 aaKnown RBP0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 C9JAW5 83 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 TNFSF15O95150 251 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 TCTE3Q8IZS6 198 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 HIGD1AQ9Y241 93 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 ZNF142P52746 1687 aaPredicted RBP0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 IGF2RP11717 2491 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 BLMP54132 1417 aaPredicted RBP0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 ANKRD30AQ9BXX3 1397 aa0.45□□□□□ -2.34
HMGCS1-207ENST00000514610 PIEZO1Q92508 2521 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms