RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
PDPN-210ENST00000513143 IGHV3OR16-12A0A075B7B8 117 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 IGKV3D-20A0A0C4DH25 116 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 SPRY2O43597 315 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 P01737 135 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 ORM1P02763 201 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 ERVFC1-1P60608 527 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 MUC21Q5SSG8 566 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 IBA57Q5T440 356 aaKnown RBP9.07□□□□□ -0.96
PDPN-210ENST00000513143 ZNF575Q86XF7 245 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 KCNS1Q96KK3 526 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 NEU1Q99519 415 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 OVOL2Q9BRP0 275 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 NAGKQ9UJ70 344 aa9.07□□□□□ -0.96
PDPN-210ENST00000513143 B4DEV8 164 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 M0R036 132 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 APOC3P02656 99 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 B9D2Q9BPU9 175 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 X6R8D5 127 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 MEGF8Q7Z7M0 2845 aa9.06□□□□□ -0.96
PDPN-210ENST00000513143 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
PDPN-210ENST00000513143 GATCO43716 136 aaKnown RBP9.05□□□□□ -0.96
PDPN-210ENST00000513143 PRM2P04554 102 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 RPL19P84098 196 aaKnown RBP9.05□□□□□ -0.96
PDPN-210ENST00000513143 C15orf54Q8N8G6 183 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 OR2D3Q8NGH3 330 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 OR10G8Q8NGN5 311 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 OR11H2Q8NH07 326 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 RPP21Q9H633 154 aaKnown RBP9.05□□□□□ -0.96
PDPN-210ENST00000513143 TP53TG3Q9ULZ0 132 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 CBY3A6NI87 242 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 GNRH2O43555 120 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 MT-ND4LP03901 98 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 TYMSP04818 313 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 CXCL1P09341 107 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 HTN1P15515 57 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 AZU1P20160 251 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
PDPN-210ENST00000513143 RRN3P1Q2M238 152 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 RNF212Q495C1 297 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 CT83Q5H943 113 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 DNLZQ5SXM8 178 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 SVBPQ8N300 66 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 RETNQ9HD89 108 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 V9GYV3 84 aa9.05□□□□□ -0.96
PDPN-210ENST00000513143 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
PDPN-210ENST00000513143 TMSB15BA0A087X1C1 80 aa9.04□□□□□ -0.96
PDPN-210ENST00000513143 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
PDPN-210ENST00000513143 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
PDPN-210ENST00000513143 ZNF493Q6ZR52 646 aa9.04□□□□□ -0.96
PDPN-210ENST00000513143 RNASE8Q8TDE3 154 aaKnown RBP9.04□□□□□ -0.96
PDPN-210ENST00000513143 TMEM263Q8WUH6 116 aaKnown RBP9.04□□□□□ -0.96
PDPN-210ENST00000513143 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
PDPN-210ENST00000513143 DNAH9Q9NYC9 4486 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 IGHV3-16A0A0C4DH30 117 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 C7orf77A4D0Y5 90 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 A8MWL6 223 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 SNAPINO95295 136 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 MIFP14174 115 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 ASIPP42127 132 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 RHEBQ15382 184 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 C16orf74Q96GX8 76 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 MDFICQ9P1T7 246 aa9.03□□□□□ -0.96
PDPN-210ENST00000513143 A0A087WWC5 75 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 ATP6V1G1O75348 118 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 GZMBP10144 247 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 RNASE3P12724 160 aaKnown RBP9.02□□□□□ -0.97
PDPN-210ENST00000513143 ZNF415Q09FC8 603 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 Q8NAQ8 132 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 TSKUQ8WUA8 353 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 CTDSP1Q9GZU7 261 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
PDPN-210ENST00000513143 MUC4Q99102 2169 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 IGHV4-28A0A0C4DH34 117 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 IGLC6P0CF74 106 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 NHLRC4P0CG21 123 aaPredicted RBP9.01□□□□□ -0.97
PDPN-210ENST00000513143 MED14OSP0DP75 135 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 S100A4P26447 101 aaKnown RBP9.01□□□□□ -0.97
PDPN-210ENST00000513143 TCL1AP56279 114 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 C9orf85Q96MD7 179 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 SSBP4Q9BWG4 385 aaPredicted RBP9.01□□□□□ -0.97
PDPN-210ENST00000513143 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 GSN-AS1Q9NRJ2 163 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 TMEM242Q9NWH2 141 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
PDPN-210ENST00000513143 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
PDPN-210ENST00000513143 HUWE1Q7Z6Z7 4374 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms