RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 KRTAP5-8O75690 187 aa2.57□□□□□ -2
RFC1-214ENST00000512726 VPS25Q9BRG1 176 aa2.57□□□□□ -2
RFC1-214ENST00000512726 IGLV3-1P01715 115 aa2.56□□□□□ -2
RFC1-214ENST00000512726 ADCYAP1P18509 176 aa2.56□□□□□ -2
RFC1-214ENST00000512726 BOKQ9UMX3 212 aaPredicted RBP2.56□□□□□ -2
RFC1-214ENST00000512726 LSM2Q9Y333 95 aaKnown RBP2.56□□□□□ -2
RFC1-214ENST00000512726 DLG5Q8TDM6 1919 aa2.56□□□□□ -2
RFC1-214ENST00000512726 EML5Q05BV3 1969 aa2.56□□□□□ -2
RFC1-214ENST00000512726 FAM236AA0A1B0GUQ0 79 aa2.55□□□□□ -2
RFC1-214ENST00000512726 FAM236BA0A1B0GV22 79 aa2.55□□□□□ -2
RFC1-214ENST00000512726 E9PCH4 1651 aa2.55□□□□□ -2
RFC1-214ENST00000512726 RPS25P62851 125 aaKnown RBP2.55□□□□□ -2
RFC1-214ENST00000512726 PEAK1Q9H792 1746 aa2.55□□□□□ -2
RFC1-214ENST00000512726 BICRAQ9NZM4 1560 aa2.55□□□□□ -2
RFC1-214ENST00000512726 FLG2Q5D862 2391 aaPredicted RBP2.54□□□□□ -2
RFC1-214ENST00000512726 TET1Q8NFU7 2136 aa2.54□□□□□ -2
RFC1-214ENST00000512726 KIDINS220Q9ULH0 1771 aa2.54□□□□□ -2
RFC1-214ENST00000512726 PDE6GP18545 87 aa2.54□□□□□ -2
RFC1-214ENST00000512726 SNX29P2Q8IUI4 249 aa2.54□□□□□ -2
RFC1-214ENST00000512726 ATP6V0E2Q8NHE4 81 aa2.54□□□□□ -2
RFC1-214ENST00000512726 MYH6P13533 1939 aa2.54□□□□□ -2
RFC1-214ENST00000512726 PHRF1Q9P1Y6 1649 aaKnown RBP2.53□□□□□ -2
RFC1-214ENST00000512726 UHRF1BP1LA0JNW5 1464 aa2.53□□□□□ -2
RFC1-214ENST00000512726 TRBV20-1A0A075B6N2 111 aa2.53□□□□□ -2
RFC1-214ENST00000512726 TMEM30CPA0ZSE6 113 aa2.53□□□□□ -2
RFC1-214ENST00000512726 IGHV3-30P01768 117 aa2.53□□□□□ -2
RFC1-214ENST00000512726 ARL14EPLP0DKL9 152 aa2.53□□□□□ -2
RFC1-214ENST00000512726 IGHV3-30-5P0DP03 117 aa2.53□□□□□ -2
RFC1-214ENST00000512726 COPZ1P61923 177 aa2.53□□□□□ -2
RFC1-214ENST00000512726 RHOHQ15669 191 aa2.53□□□□□ -2
RFC1-214ENST00000512726 OCIAD2Q56VL3 154 aa2.53□□□□□ -2
RFC1-214ENST00000512726 TAS2R8Q9NYW2 309 aa2.53□□□□□ -2
RFC1-214ENST00000512726 ERG28Q9UKR5 140 aa2.53□□□□□ -2
RFC1-214ENST00000512726 NOP16Q9Y3C1 178 aaKnown RBP2.53□□□□□ -2
RFC1-214ENST00000512726 MUC6Q6W4X9 2439 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 PTPRGP23470 1445 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 NPFFO15130 113 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 GYPBP06028 91 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 CSAG1Q6PB30 78 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 AMELYQ99218 206 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 COL6A6A6NMZ7 2263 aa2.52□□□□□ -2.01
RFC1-214ENST00000512726 M0R2P5 195 aa2.51□□□□□ -2.01
RFC1-214ENST00000512726 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
RFC1-214ENST00000512726 SLC25A26Q70HW3 274 aa2.51□□□□□ -2.01
RFC1-214ENST00000512726 ATOH7Q8N100 152 aa2.51□□□□□ -2.01
RFC1-214ENST00000512726 SAR1AQ9NR31 198 aa2.51□□□□□ -2.01
RFC1-214ENST00000512726 C22orf24Q9Y442 160 aa2.51□□□□□ -2.01
RFC1-214ENST00000512726 ASCC3Q8N3C0 2202 aaKnown RBP2.51□□□□□ -2.01
RFC1-214ENST00000512726 NCR3O14931 201 aa2.5□□□□□ -2.01
RFC1-214ENST00000512726 IGF2P01344 180 aa2.5□□□□□ -2.01
RFC1-214ENST00000512726 ZNF670-ZNF695F2Z2N8 137 aa2.49□□□□□ -2.01
RFC1-214ENST00000512726 IL7P13232 177 aa2.49□□□□□ -2.01
RFC1-214ENST00000512726 POLR2JP52435 117 aaKnown RBP2.49□□□□□ -2.01
RFC1-214ENST00000512726 UNQ5815/PRO19632Q6UWF5 114 aa2.49□□□□□ -2.01
RFC1-214ENST00000512726 SBSPONQ8IVN8 264 aa2.49□□□□□ -2.01
RFC1-214ENST00000512726 TRAV2A0A0B4J234 112 aa2.48□□□□□ -2.01
RFC1-214ENST00000512726 A0A0G2JMM0 328 aa2.48□□□□□ -2.01
RFC1-214ENST00000512726 NUPR2A6NF83 97 aa2.48□□□□□ -2.01
RFC1-214ENST00000512726 EFCAB10A6NFE3 127 aa2.48□□□□□ -2.01
RFC1-214ENST00000512726 TPST1O60507 370 aa2.48□□□□□ -2.01
RFC1-214ENST00000512726 LYPD5Q6UWN5 251 aa2.48□□□□□ -2.01
RFC1-214ENST00000512726 J3QLW9 94 aa2.47□□□□□ -2.01
RFC1-214ENST00000512726 RPL37AP61513 92 aaKnown RBP2.47□□□□□ -2.01
RFC1-214ENST00000512726 MRPL36Q9P0J6 103 aaKnown RBP2.47□□□□□ -2.01
RFC1-214ENST00000512726 TRAV17A0A0B4J275 112 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 K7EP13 123 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 M0R129 80 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 IGKCP01834 107 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 FXYD4P59646 89 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 DYNLRB2Q8TF09 96 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 PPDPFLQ8WWR9 84 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 LRP5O75197 1615 aa2.46□□□□□ -2.02
RFC1-214ENST00000512726 ERCC6Q03468 1493 aa2.45□□□□□ -2.02
RFC1-214ENST00000512726 DMAC1Q96GE9 116 aa2.45□□□□□ -2.02
RFC1-214ENST00000512726 SELENOWP63302 87 aa2.44□□□□□ -2.02
RFC1-214ENST00000512726 ARL11Q969Q4 196 aa2.44□□□□□ -2.02
RFC1-214ENST00000512726 TMEM191AQ9H0A3 160 aa2.44□□□□□ -2.02
RFC1-214ENST00000512726 SPTBP11277 2137 aa2.44□□□□□ -2.02
RFC1-214ENST00000512726 CTTNBP2Q8WZ74 1663 aa2.44□□□□□ -2.02
RFC1-214ENST00000512726 MED12Q93074 2177 aa2.43□□□□□ -2.02
RFC1-214ENST00000512726 IQCJQ1A5X6 159 aa2.43□□□□□ -2.02
RFC1-214ENST00000512726 ATG5Q9H1Y0 275 aa2.43□□□□□ -2.02
RFC1-214ENST00000512726 ATG2AQ2TAZ0 1938 aa2.42□□□□□ -2.02
RFC1-214ENST00000512726 SCIMPQ6UWF3 145 aa2.42□□□□□ -2.02
RFC1-214ENST00000512726 C1orf54Q8WWF1 131 aa2.42□□□□□ -2.02
RFC1-214ENST00000512726 MRPL35Q9NZE8 188 aaKnown RBP2.42□□□□□ -2.02
RFC1-214ENST00000512726 PYYP10082 97 aa2.41□□□□□ -2.02
RFC1-214ENST00000512726 EFNA4P52798 201 aa2.41□□□□□ -2.02
RFC1-214ENST00000512726 PSMG3Q9BT73 122 aaPredicted RBP2.41□□□□□ -2.02
RFC1-214ENST00000512726 ROS1P08922 2347 aa2.41□□□□□ -2.02
RFC1-214ENST00000512726 CASZ1Q86V15 1759 aa2.41□□□□□ -2.02
RFC1-214ENST00000512726 HELZ2Q9BYK8 2649 aaKnown RBP2.4□□□□□ -2.02
RFC1-214ENST00000512726 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.4□□□□□ -2.03
RFC1-214ENST00000512726 GUCA1AP43080 201 aaPredicted RBP2.4□□□□□ -2.03
RFC1-214ENST00000512726 RRAS2P62070 204 aaPredicted RBP2.4□□□□□ -2.03
RFC1-214ENST00000512726 MIC13Q5XKP0 118 aa2.4□□□□□ -2.03
RFC1-214ENST00000512726 LINC00575Q6W349 94 aa2.4□□□□□ -2.03
RFC1-214ENST00000512726 LINC00470Q9BZP3 86 aa2.4□□□□□ -2.03
RFC1-214ENST00000512726 PLXNA2O75051 1894 aa2.39□□□□□ -2.03
RFC1-214ENST00000512726 TRBV10-1A0A0K0K1A3 114 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms