RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SLC25A6P12236 298 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 KRTDAPP60985 99 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 SEC11AP67812 179 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 RNF182Q8N6D2 247 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 SIGLECL1Q8N7X8 197 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 FAM213BQ8TBF2 198 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 RPS4Y2Q8TD47 263 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRAV9-2A0A087WT02 112 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 KLLNB2CW77 178 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF736B4DX44 427 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 TMEM262E9PQX1 116 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 H3BRM9 83 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 UQCRQO14949 82 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 CD3DP04234 171 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 PTHLHP12272 177 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF823P16415 610 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 FOXI1Q12951 378 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 RRN3P1Q2M238 152 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 C10orf128Q5T292 105 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC00242Q5T6M2 205 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 Q6ZPA2 131 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF584Q8IVC4 421 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 RPP25LQ8N5L8 163 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 OTOSQ8NHW6 89 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRAPPC1Q9Y5R8 145 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 MTORP42345 2549 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 HEATR1Q9H583 2144 aaKnown RBP3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 GRIFINA4D1Z8 144 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 C17orf112F2Z3M2 114 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 LST1O00453 97 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 UBE2L6O14933 153 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 LY6HO94772 140 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC00869P0C866 280 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 AMTNQ6UX39 209 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 MRPL30Q8TCC3 161 aaKnown RBP3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC00526Q96FQ7 95 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 C2orf50Q96LR7 162 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 CST11Q9H112 138 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 LHFPL6Q9Y693 200 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 ACANP16112 2415 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV3OR16-13A0A075B7E8 117 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV3-64DA0A0J9YX35 117 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 E7EQL1 145 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 H3BSH0 61 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 J3QRE1 110 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 PSPHP1O15172 72 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGKV3-15P01624 115 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRACP01848 142 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZFP36P26651 326 aaKnown RBP3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 DAZAP2Q15038 168 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 Q56UQ5 140 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 FAM27BQ5VT28 67 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 EBLN2Q6P2I7 272 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 MORN3Q6PF18 240 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 DRAM1Q8N682 238 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 LYZL4Q96KX0 146 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 CCL19Q99731 98 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 AGPAT4-IT1Q9H0P7 198 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 NAA60Q9H7X0 242 aa3.81□□□□□ -1.8
TRAPPC11-208ENST00000511955 TLN2Q9Y4G6 2542 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 NIPBLQ6KC79 2804 aaeCLIP3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 HIVEP1P15822 2718 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF73O43830 326 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 SERF1AO75920 110 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 CST7O76096 145 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 DUSP14O95147 198 aaKnown RBP3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV4-30-4P0DP06 118 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC00310P59036 64 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC00313P59037 77 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 PCBD1P61457 104 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR10AG1Q8NH19 301 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 CLDND2Q8NHS1 167 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 VSTM2AQ8TAG5 236 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 AMELYQ99218 206 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 PLEKHF2Q9H8W4 249 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 TP73-AS1Q9UF72 201 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 ARID1AO14497 2285 aa3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 SETD2Q9BYW2 2564 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV1-58A0A0C4DH39 117 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 F8W1H4 67 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 COX7A2LO14548 114 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 COX7A2P2O60397 106 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 SNCGO76070 127 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 CCL20P78556 96 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 Q0VG73 95 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 MSMPQ1L6U9 139 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC01590Q5TEZ4 76 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF627Q7L945 461 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR5AS1Q8N127 324 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR51H1Q8NH63 302 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 TIMM17AQ99595 171 aa3.79□□□□□ -1.8
TRAPPC11-208ENST00000511955 CCL13Q99616 98 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms