RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.6
SCLT1-209ENST00000511426 LYZL1Q6UWQ5 148 aa11.27□□□□□ -0.6
SCLT1-209ENST00000511426 C11orf21Q9P2W6 132 aa11.27□□□□□ -0.6
SCLT1-209ENST00000511426 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 SNAI2O43623 268 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 RAB4BP61018 213 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 CACNG7P62955 275 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 COA6Q5JTJ3 125 aaKnown RBP11.27□□□□□ -0.61
SCLT1-209ENST00000511426 FAM159AQ6UWV7 190 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 ZNF493Q6ZR52 646 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
SCLT1-209ENST00000511426 C5orf52A6NGY3 159 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
SCLT1-209ENST00000511426 APCSP02743 223 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 NF1P21359 2839 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 ASIPP42127 132 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 GFI1BQ5VTD9 330 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 TMEM158Q8WZ71 300 aa11.26□□□□□ -0.61
SCLT1-209ENST00000511426 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
SCLT1-209ENST00000511426 CAMPP49913 170 aa11.25□□□□□ -0.61
SCLT1-209ENST00000511426 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
SCLT1-209ENST00000511426 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
SCLT1-209ENST00000511426 TPPP3Q9BW30 176 aa11.25□□□□□ -0.61
SCLT1-209ENST00000511426 SETXQ7Z333 2677 aaKnown RBP11.25□□□□□ -0.61
SCLT1-209ENST00000511426 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 STHQ8IWL8 128 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 LOC105371267A0A1B0GV96 52 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 J3KRW8 73 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 ANXA2RQ3ZCQ2 193 aa11.24□□□□□ -0.61
SCLT1-209ENST00000511426 GRIFINA4D1Z8 144 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 UBE2CO00762 179 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 WIPF1O43516 503 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 S100A4P26447 101 aaKnown RBP11.23□□□□□ -0.61
SCLT1-209ENST00000511426 OR10J3Q5JRS4 329 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
SCLT1-209ENST00000511426 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 NAGKQ9UJ70 344 aa11.23□□□□□ -0.61
SCLT1-209ENST00000511426 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 M0R2Z0 102 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 IGKV3-20P01619 116 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 Q0VG73 95 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 SLAQ13239 276 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
SCLT1-209ENST00000511426 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 IGHV1OR15-1A0A075B7D0 117 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 HOXA5P20719 270 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 NTF3P20783 257 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 NDUFA6P56556 154 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 KIR3DS1Q14943 382 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 TWIST1Q15672 202 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 C19orf73Q9NVV2 129 aa11.21□□□□□ -0.61
SCLT1-209ENST00000511426 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 INSP01308 110 aa11.2□□□□□ -0.62
SCLT1-209ENST00000511426 SNRPEP62304 92 aaKnown RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 GTSCR1Q86UQ5 136 aa11.2□□□□□ -0.62
SCLT1-209ENST00000511426 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
SCLT1-209ENST00000511426 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 RBMY1BA6NDE4 496 aaKnown RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 RBMY1EA6NEQ0 496 aaKnown RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 RBMY1DP0C7P1 496 aaKnown RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 SPANXN1Q5VSR9 72 aa11.2□□□□□ -0.62
SCLT1-209ENST00000511426 MORN3Q6PF18 240 aaPredicted RBP11.2□□□□□ -0.62
SCLT1-209ENST00000511426 PRIMA1Q86XR5 153 aa11.2□□□□□ -0.62
SCLT1-209ENST00000511426 C3orf56Q8N813 242 aa11.2□□□□□ -0.62
SCLT1-209ENST00000511426 H3BVH4 76 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 NXPH4O95158 308 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 MUC21Q5SSG8 566 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 FAM104BQ5XKR9 115 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 C12orf54Q6X4T0 127 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 C1QTNF4Q9BXJ3 329 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
SCLT1-209ENST00000511426 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
SCLT1-209ENST00000511426 PPBPP02775 128 aa11.18□□□□□ -0.62
SCLT1-209ENST00000511426 CD7P09564 240 aa11.18□□□□□ -0.62
SCLT1-209ENST00000511426 Q6ZQT7 251 aa11.18□□□□□ -0.62
SCLT1-209ENST00000511426 RNASE3P12724 160 aaKnown RBP11.17□□□□□ -0.62
SCLT1-209ENST00000511426 SRIP30626 198 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 ZNF124Q15973 351 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 ALKBH7Q9BT30 221 aaPredicted RBP11.17□□□□□ -0.62
SCLT1-209ENST00000511426 ESDP10768 282 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 PIK3CD-AS1Q5SR53 167 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 C9orf85Q96MD7 179 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 LAMTOR2Q9Y2Q5 125 aa11.17□□□□□ -0.62
SCLT1-209ENST00000511426 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
SCLT1-209ENST00000511426 GNRH2O43555 120 aa11.16□□□□□ -0.62
SCLT1-209ENST00000511426 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
SCLT1-209ENST00000511426 ZMAT5Q9UDW3 170 aaKnown RBP11.16□□□□□ -0.62
SCLT1-209ENST00000511426 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
SCLT1-209ENST00000511426 Q8N1Y9 231 aa11.15□□□□□ -0.62
SCLT1-209ENST00000511426 HIST3H2BBQ8N257 126 aa11.15□□□□□ -0.62
SCLT1-209ENST00000511426 AP1S3Q96PC3 154 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms